Hi Will, you need to jump into biomart-perl/lib/BioMart/Web.pm. You cannot do it using API I am afraid unless you port the chunk of MartView code from Web.pm into your script.
cheers syed On Fri, 2008-07-25 at 16:21 +0100, William Spooner wrote: > Hi, > > I have a suspected proxy problem with MartView whereby the browser > connection gets terminated when downloading large result files. I > would like to be able to reproduce the problem from the command line > using e.g. wget, but I cannot formulate a URL string that can initiate > a result set download. Is construction of such a URL possible? Here is > the result set I want to export; > > http://www.wormbase.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=wormbase_gene.default.sequence.gene > > |wormbase_gene.default.sequence.public_name| > wormbase_gene > .default > .sequence > .peptide > &FILTERS > =wormbase_gene.default.filters.species_selection."Caenorhabditis > elegans"| > wormbase_gene > .default.filters.identity_status."Live"&VISIBLEPANEL=resultspanel > > Thanks in advance, > > Will > > --- > William Spooner > Visiting Scientist > [EMAIL PROTECTED] > > -- ====================================== Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ======================================
