Hi, I have used MartBuilder and MartEditor to build and configure a mart. I have two questions. 1. When I choose Export from the MartEditor File menu to save the configuration nothing happens. Is the configuration saved somewhere automatically or should I be asked where?
2. I created myRegistry.xml in the biomart-perl/conf directory and ran perl bin/configure.pl -r conf/myRegistry.xml. I am not asked any questions at this step and the output looks like Got usable Apache in /usr/local/apache-2.2.8/bin/httpd, probing for version & ModPerl configuration Have Apache DSO-support and ModPerl library file present, configuring ModPerl in httpd.conf. Libdir /usr/local/biomart-perl/lib is not in @INC, adding to @INC Connection parameters of [test_maize_mart] [ OK ] [NEW CONFIGURATION] .... WITH MEMORY [default] default ... test_maize_mart .......... 001/001 ... gene_stable_id ............................ (RDBMS) localhost:3306 ................ OK Setting possible links between datasets ....(scanning) 100% ....(linking) 100% ....(sorting) 100% ....(clustering) 1/1 - 0 remain ....(resolving) 100% Building templates for visible datasets .... 100% Compiling templates for visible datasets [1/1] Attribute Panel of Dataset.. :gene_stable_id [1/1] Filter Panel of Dataset..... :gene_stable_id I start MartView by typing /usr/bin/httpd -d $PWD In the web browser I can type http://localhost:port and see the BioMart Project Page but if I add /biomart/martview I get a 500 Internal Server Error. Thanks in advance for your help, Liisa
