Hi Liisa,
I believe what you need is really some sort of control to browse
sequences. Its not possible to set an offset/end based filter on
sequence data because unless you define start/end values in your mart
and then through the filters, you consider the sequences corresponding
to these start and end values in the mart. Basically, the filter would
run over the columns (start/end) and send the seqeunce column back.
Cheers
Syed
Liisa Koski wrote:
Hi,
I have a main table that consists of only 'seq_acc' and 'sequence'
columns. I want to create filters (using MartEditor) for 'start_bp' and
'stop_bp' to extract only a portion of the sequence. I'm having trouble
configuring the mart. Any help would be much appreciated.
internalName seq_region_end
displayName seq_region_end
description
hidden
hideDisplay
field sequence
value
tableConstraint main
key seq_region_key
type text
qualifier <
legal_qualifiers
otherFilters
buttonURL
regexp
defaultValue
defaultOn
filterList
setAttributePage
setAttribute
colForDisplay
pointerDataset
pointerInterface
pointerFilter
displayType text
multipleValues
graph
style
autoCompletion
dependsOnType
dependsOn
checkForNulls
Thanks,
Liisa
