2009/12/17 Kiran Mukhyala <[email protected]>: > In that case, I think I will need the MartBuilder XML files to create > Ensembl-56 marts from scratch. I just asked for these files on > ensembl-dev but please let me know in case you know where to find them. Have a look at: http://bergman-lab.blogspot.com/search/label/biomart
I described there how to add custom data to the existing marts and I also provided XML-files for the Ensembl Mart 55. Unless you do something fancy, you can probably use the 55 XMLs and then run 'Update All Schemas' from the MartBuilder menu to let it pick up any changes. You have to do that step anyway to incorporate your custom data. If I remember correctly, either MartBuilder or MartEditor will come up with some error messages. Those are fine though. I can find out the exact messages and their cause once I am back from my holidays in two weeks. Best Wishes, Joachim -- B.1079 Michael Smith Building Faculty of Life Sciences The University of Manchester Oxford Road Manchester M13 9PT United Kingdom
