On Wed, Jun 30, 2010 at 10:39 AM, Jeremy Conlin <jlcon...@gmail.com> wrote:
> Essentially my question is: how can I get a nice color distribution
> while at the same time avoid the extreme scaling issues associated
> with some data being zero (while all the other data is ~16)?

It seems that plot_surface method does have some issue with NaNs.
I think it is best if you manually adjust the color range. For example,

vmin = np.nanmin(mass)
vmax = np.nanmax(mass)

ax.plot_surface(X, Y, mass, rstride=1, cstride=1, cmap=cm.jet,
                      vmin=vmin, vmax=vmax)

IHTH,

-JJ

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