Hello all,
I had the same trouble than Doug when using my OS 10.6 , so I downloaded the
latest build as posted by Aaron (
http://gel.ahabs.wisc.edu/mauve/snapshots/2009/2009-10-21/MacOS/Mauve-snapshot_2009-10-21.dmg)<http://gel.ahabs.wisc.edu/mauve/snapshots/2009/2009-10-21/MacOS/Mauve-snapshot_2009-10-21.dmg>
I run some three genomes and instead of error 134 now I get error 254. here
is the output of the console:
OS name is: Mac OS X arch: x86_64
Executing:
/Volumes/Mauve snapshot_2009-10-21/Mauve.app/Contents/MacOS/mauveAligner
--output=Ms_aligmentsTest --island-size=50
--island-output=Ms_aligmentsTest.islands --backbone-size=50
--max-backbone-gap=50 --backbone-output=Ms_aligmentsTest.backbone
--id-matrix=Ms_aligmentsTest.id_matrix
--output-alignment=Ms_aligmentsTest.alignment
--output-guide-tree=Ms_aligmentsTest.guide_tree
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1425NC_012588.gbk
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1425NC_012588.gbk.sslist
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1627NC_012632.gbk
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1627NC_012632.gbk.sslist
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M164_NC_012726.gbk
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M164_NC_012726.gbk.sslist
Sequence loaded successfully.Error opening Ms_aligmentsTest
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1425NC_012588.gbk
2608832 base pairs.
Sequence loaded successfully.
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M1627NC_012632.gbk
2692402 base pairs.
Sequence loaded successfully.
/Users/hinsby1/Documents/DATA_1/UIUC/UIUC_gnome_data/CurrentSislandicus_NCBI/M164_NC_012726.gbk
2586647 base pairs.
Using weight 15 mers for initial seeds
Creating sorted mer list
Create time was: 1 seconds.
Creating sorted mer list
Create time was: 1 seconds.
Creating sorted mer list
Create time was: 1 seconds.
Exited with error code: 254
any suggestion or help will be deeply appreciated.
Hinsby
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