Hello,
I'm trying to use the "projectAndStrip" command as seen here: 
http://gel.ahabs.wisc.edu/barphlye/ 
The program runs and produces output if I do not give it any inputs.  (i.e. 
shows the help message).  However, if I pass it an xmfa file from 
progressiveMauve an output file, and the different genome numbers to use, a la:
./projectAndStrip /mnt/p/Gv/MauveForGv36 out_GV9_mauve 0 1 2 3 4 5 6 7 8 
Which is a dataset with 9 genomes, it seg faults.  The program was downloaded 
from: 
http://gel.ahabs.wisc.edu/mauve/snapshots/2012/2012-03-27/linux-x64/
And the command was run on a 64 bit version of Centos 5.5
Any ideas what i am doing wrong?
Thanks!
~josh

Center for Genomic Sciences
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