Hi John

Please have a look at the attachment. I have two different duplications and
the defects are in the duplications. If I re-run I get the same defects at
the same positions. Is this the problem you are facing?  I have plotted
with pyplot and also with Mathematica, no difference at all. I have also
tried with "mp.at_beginning(mp.output_epsilon)" but changes.

G

On Wed, 29 May 2019 at 00:45, John Weiner <johwei...@gmail.com> wrote:

> Hi Galaa,
>
> I’ve seen similar things, large isolated, unphysical excursions in
> otherwise perfectly reasonable results when plotting data from a meep
> output.  Are you using Matplotlib/pyplot for your plotting routines?  And
> do the excursions appear at exactly the same points and with the same
> amplitudes reproducibly or do they vary unpredictably?  I would be quite
> interested to know if anyone has a good explanation and a good fix.
>
> Best regards,
>
> John
>
> > On May 28, 2019, at 17:33, Galaa Badrakh <galaa.cod...@gmail.com> wrote:
> >
> > Hi All.
> >
> > I am new to MEEP and trying to use the "geometric_objects_duplicates"
> feature. After simulation complete, I extracted the dielectric spatial
> profile with "data=sim.get_array(center=mp.Vector3(),
> size=mp.Vector3(0.0,0.0,height), component=mp.Dielectric)" to double check
> my geometry but I see unexpected lines at some interfacing points, have a
> look at attached picture. Is this the artifact of subpixel smoothing? If
> so, how to avoid this artifact?
> >
> > Thanks in advance
> >
> > G
> > <structure.png>_______________________________________________
> > meep-discuss mailing list
> > meep-discuss@ab-initio.mit.edu
> > http://ab-initio.mit.edu/cgi-bin/mailman/listinfo/meep-discuss
>
>
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