yeah that pip command gives me trouble too! i really am a newbie at all this so sorry for seeming slow. when i have my command window open (idle) what do i type in to import fasta from biopython? Jessica Rose, PhD PDF Department of MicrobiologyFaculty of MedicineTechnion, Haifa+972-52-378-1674
On Monday, March 6, 2017 1:36 PM, Tim Richardson <t...@growthpath.com.au> wrote: The module is not installed. Read pyfasta installation instructions. Usually it will be pip install pyfasta On Mon, 6 Mar. 2017, 21:57 Rory Hart, <hart...@gmail.com> wrote: Oh dear you've asked programmers about what text editor they prefer, let the religious wars begin! I would suggest sublime 3 personally. It is straightforward to use out of the box and later you can install a bunch of plugins once you get a bit more advanced that can help your coding. I assume by your name you are a lady (or identify as such), are you aware of the PyLadies Meetup? > On 6 Mar. 2017, at 8:43 pm, William ML Leslie <william.leslie....@gmail.com> > wrote: > > On 3 March 2017 at 18:57, Jessica Rose via melbourne-pug > <melbourne-pug@python.org> wrote: >> Hi there, I am having trouble with importing or reading text files (fasta >> files) when writing code with python. I am very new to this and have been >> practicing python code writing from the command window with great success. >> but the time has come for me to apply what i have learned to real files. I >> am a protein biologist and am starting to get more into bioinformatics. >> python is definitely the way for me to go. >> >> i have looked at every online site and tried just about everything >> suggested. Do you think there is an easy solution to my problem? I am >> working primarily on a windows operating system. >> > > Hello! It is great that you are getting to saving your programs to a file. > > What are you trying so far? Are you using notepad.exe? Note that > wordpad and MS Word will not work! Some people also like notepad++ > when on Windows. > > When you save your file, make sure the 'save as type' select list > shows 'all files *.*' if it doesn't have anything for python. then > you can add a .py extension on your file. > > Have you ever used the printscreen feature to get an image of the > problem you are seeing? > > -- > William Leslie > > Notice: > Likely much of this email is, by the nature of copyright, covered > under copyright law. You absolutely MAY reproduce any part of it in > accordance with the copyright law of the nation you are reading this > in. Any attempt to DENY YOU THOSE RIGHTS would be illegal without > prior contractual agreement. > _______________________________________________ > melbourne-pug mailing list > melbourne-pug@python.org > https://mail.python.org/mailman/listinfo/melbourne-pug _______________________________________________ melbourne-pug mailing list melbourne-pug@python.org https://mail.python.org/mailman/listinfo/melbourne-pug -- Tim Richardson, Director GrowthPath - Profit Engineers
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