Hi, just enter something like "segmentation" into the search/filter box of the CMake GUI. There is an entry like MITK_BUILD_org.mitk.gui.qt.segmentation or similar which enables the segmentation plugin. As it is hard to oversee that one I guess there is another problem. Could it be that you chose the wrong build directory when configuring the MITK build? For example when you set the build directory of the MITK-superbuild to "/home/user/MITK-superbuild" and built everything, you still have to configure MITK *itself*. Therefore, after the superbuild, open CMake GUI again and change the build directory to "/home/user/MITK-superbuild/MITK-build". Notice the "MITK-build" directory at the end. There you have all the configuration options of MITK itself. This does only work when the superbuild was successful. Otherwise the MITK-build directory is empty.
However, as it seems you just want to use MITK instead of programming something with MITK, use the binary installers that are available from our website [1]. You don't have to build anything when you just want to use our application with some standard plugins like segmentation. [1] http://mitk.org/wiki/Downloads (Please read the note for Linux users on top of the download links on that site) Hope that helps, Stefan ________________________________________ Von: Rockers, Elijah D. [edrock...@houstonmethodist.org] Gesendet: Mittwoch, 16. September 2015 16:04 An: Kislinskiy, Stefan; Bajaj, Sahil Betreff: Re: [mitk-users] Problem making MITK with Ubuntu 12.04 Stefan, Thanks, if I encounter any more errors I'll be sure to record them for you, I have a build compiling right now with what I assume is less of the plugins enabled. As far as enabling only those plugins I really need, I saw nothing in the cmake configuration dialogue that resembled anything in the list of available plugins - I have reviewed the documentation pretty thoroughly for build instructions, but maybe I am still missing something? For example if I want to use the Segmentation Plugin to be enabled, I have found nothing in the user manual that explains how to enable this during the build. As far as what I specifically need, to be perfectly honest I do not know. I am installing this software for a co-worker, but I can get him to review the plugin list and check off which ones he thinks he will need, if that would help. Thanks for your patience, Eli On 09/16/2015 03:57 AM, Kislinskiy, Stefan wrote: > Hi, > > without a more specific error description it is hard to help here. :) In > general we recommend to enable only those plugins that you really need. This > speeds up compile time and the Workbench is not overloaded with unnecessary > stuff. However, we are still interested in the error you encountered though. > Which functionality do you need? If you don't need something "special" and > you don't want to implement your own plugins, you could also try our binary > installer, which comes with the most used plugins activated. You find our > documentation on our website. If you are interested in using available > plugins, a good starting point is the plugin users manual: > https://urldefense.proofpoint.com/v2/url?u=http-3A__docs.mitk.org_2015.05_PluginListPage.html&d=BQIFAg&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=bU8dz4Nk_XuP4Wyrvk5aX7FMaxnIpAqQqIwAiOD-hVc&s=I4t17BsgvFK2oEn4sv1LCEaje334cy-va5Qk2lZxA64&e= > > Best, > Stefan > > -----Original Message----- > From: Rockers, Elijah D. [mailto:edrock...@houstonmethodist.org] > Sent: Dienstag, 15. September 2015 19:28 > To: Kislinskiy, Stefan; mitk-users@lists.sourceforge.net > Cc: Bajaj, Sahil > Subject: Re: [mitk-users] Problem making MITK with Ubuntu 12.04 > > Hi, > > The cmake-gui worked fine. I was able to easily generate and build MITK. > When I start the workbench however, there were no available tools/plugins for > processing. I attempted another build, this time configuring cmake to include > all plugins (I think) but I received an error during the build and it was not > completed. Is there some documentation I can read that covers activating the > plugins for processing? I only saw how to make my own plugins, I would like > to use the plugins that already exist. > > Thanks > > On 09/14/2015 05:15 PM, Kislinskiy, Stefan wrote: >> Hi, after you installed gcc-4.7 and g++-4.7 you have to set these compilers >> at the very beginning instead of the default ones. For example, create a >> clean build directory and in case you are using ccmake, set the two >> variables CMAKE_[C/CXX]_COMPILER already as command line arguments (I guess >> it would be something like "ccmake >> -DCMAKE_C_COMPILER:FILEPATH=/usr/bin/gcc-4.7 >> -DCMAKE_CXX_COMPILER:FILEPATH=/usr/bin/g++-4.7 path/to/src". In case of >> cmake-gui, you can specify these compilers easily the first time you press >> configure and are prompted for the generator. >> >> Stefan >> ________________________________________ >> Von: Rockers, Elijah D. [edrock...@houstonmethodist.org] >> Gesendet: Montag, 14. September 2015 19:53 >> An: mitk-users@lists.sourceforge.net >> Cc: Bajaj, Sahil >> Betreff: [mitk-users] Problem making MITK with Ubuntu 12.04 >> >> Hello, >> >> >> I am having trouble completeing the build on Ubuntu 12.04LTS. ccmake tells >> me that I need to install the two different compilers, gcc and g++ which I >> have done, but it is still giving me the error message. I have attached the >> output log. I reviewed it, but did not see anything to indicate gcc or g++ >> were not correctly installed. >> >> >> I was unable to git clone from >> https://urldefense.proofpoint.com/v2/url?u=http-3A__git.mitk.org&d=BQIFAw&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=g1gMM1egoOJGrnntWvtW32RfkL42qPirmIRlDDTOVLM&s=Sb-byNoLmQm_xl4mrzkka9njl7T8f3ekrBc_7Vjrx2s&e= >> , so I had to use the mirror. >> >> >> Here is the exact error message I get from cmake: >> >> >> CMake Error at CMakeLists.txt:96 (message): >> GCC version must be at least 4.7.3 >> >> If you are using Ubuntu 12.04, you can easily install gcc and g++ 4.7.3 >> (or >> any later version available) in addition to your version 4.6.3: >> >> sudo add-apt-repository ppa:ubuntu-toolchain-r/test >> sudo apt-get update >> sudo apt-get install gcc-4.7 g++-4.7 >> >> Make sure to explicitly specify these compilers when configuring MITK: >> >> CMAKE_C_COMPILER:FILEPATH=/usr/bin/gcc-4.7 >> CMAKE_CXX_COMPILER:FILEPATH=/usr/bin/g++-4.7 >> >> For more information on the proposed PPA see the Toolchain Updates >> section >> of >> https://urldefense.proofpoint.com/v2/url?u=https-3A__wiki.ubuntu.com_T >> oolChain&d=BQIFAw&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyr >> Bxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=g1gMM1egoOJGrnntWvtW32RfkL42 >> qPirmIRlDDTOVLM&s=2hMIGB9HjwuTZsAcqv1Dwp14jkxmO70yxdI3KygxsKk&e= >> .<https://urldefense.proofpoint.com/v2/url?u=https-3A__wiki.ubuntu.com >> _ToolChain&d=BQIFAw&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xb >> yrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=g1gMM1egoOJGrnntWvtW32RfkL >> 42qPirmIRlDDTOVLM&s=2hMIGB9HjwuTZsAcqv1Dwp14jkxmO70yxdI3KygxsKk&e= > >> >> >> Thanks >> >> Houston Methodist. Leading Medicine. >> >> Houston Methodist is ranked by U.S.News & World Report as one of America's >> "Best Hospitals" in 11 specialties and designated as a Magnet hospital for >> excellence in nursing. Houston Methodist has also been named to FORTUNE(r) >> Magazine's "100 Best Companies to Work For(r)" list for 10 years in a row. >> Visit us at houstonmethodist.org. Follow us at >> https://urldefense.proofpoint.com/v2/url?u=http-3A__twitter.com_MethodistHosp&d=BQIFAw&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=g1gMM1egoOJGrnntWvtW32RfkL42qPirmIRlDDTOVLM&s=i0tRAJ0_cJRmDOO8F56w71a7vMUYuKmyiMVe4XiN7tM&e= >> and >> https://urldefense.proofpoint.com/v2/url?u=http-3A__facebook.com_HoustonMethodist&d=BQIFAw&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=g1gMM1egoOJGrnntWvtW32RfkL42qPirmIRlDDTOVLM&s=hAaSu-JyRj9TqfzQ4piBcIS2awjHVHcyUgA_8gLEl5k&e= >> . >> >> ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston >> Methodist and/or its relevant affiliates and may contain restricted and >> privileged material for the sole use of the intended recipient(s). Any >> review, use, distribution or disclosure by others is strictly prohibited. If >> you are not the intended recipient (or authorized to receive for the >> recipient), please contact the sender and delete all copies of the message. >> Thank you. >> > > ------------------------------------------------------------------------------ > _______________________________________________ > mitk-users mailing list > mitk-users@lists.sourceforge.net > https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.sourceforge.net_lists_listinfo_mitk-2Dusers&d=BQIFAg&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=bU8dz4Nk_XuP4Wyrvk5aX7FMaxnIpAqQqIwAiOD-hVc&s=Eh4MVxc4ADxSozCkLWllbBDlCl8D5UVQs_sPsnN-hiY&e= ------------------------------------------------------------------------------ Monitor Your Dynamic Infrastructure at Any Scale With Datadog! Get real-time metrics from all of your servers, apps and tools in one place. 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