Hi again,
Just to let someone who may have the same issue in the future know,
building the whole project in the release mode and not the debug mode fixed
the issue. Only a few weeks of fiddling around the code and cmake files!
Best wishes
Dora
On Thu, May 5, 2016 at 2:50 PM, Admin Uniapp <contactuni...@gmail.com>
wrote:
> Hi everyone again,
>
> So I digged down a little more into the MITK code and I found out that the
> crash happens when it reaches:
>
> itk::GDCMImageIO::CanReadFile
>
> As I said this type of crash does not happen on Linux, on the binary
> release for OSX and it did not happen when I was compiling my code on Mac
> before an Apple update. I did search for similar problems with GDCM library
> and there are a few examples on the net but mostly from a couple of years
> ago with older versions of ITK. I was wondering if this has anything to do
> with the type of tags associated with my DICOM data.
>
> Can somebody share some thoughts please? This problem has been going on
> for a few weeks now.
>
> All the best
> Dora
>
> On Thu, Apr 28, 2016 at 6:17 PM, Admin Uniapp <contactuni...@gmail.com>
> wrote:
>
>> Hello Jonas,
>>
>> Thanks for your email. This is the last output from the application
>> before it crashes:
>>
>> QFileInfo::absolutePath: Constructed with empty filename
>>
>> QFileInfo::absolutePath: Constructed with empty filename
>>
>> QFileInfo::absolutePath: Constructed with empty filename
>>
>> QFileInfo::absolutePath: Constructed with empty filename
>>
>> SQL failed
>>
>> Bad SQL: INSERT OR REPLACE INTO TagCache VALUES(?,?,?)
>>
>> Error text: attempt to write a readonly database Unable to fetch row
>>
>> Assertion failed: (GetVR().Compatible( de.GetVR() ) || de.GetVR() ==
>> VR::INVALID), function SetFromDataElement, file
>> /Users/cmg/Install/MITK/MITK-build/ep/src/GDCM/Source/DataStructureAndEncodingDefinition/gdcmAttribute.h,
>> line 445.
>>
>> 9/DICOMDAT/SDY00000/SRS00018/IMG00284/Users/cmg
>> /Desktop/Project/C9/DICOMDAT/SDY00000/SRS00018/IMG00285/Users/cmg
>> /Desktop/Project/C9/DICOMDAT/SDY00000/SRS00018/IMG00286/Users/cmg/Desktop/Project/C9/DICOMDAT/SDY00000/SRS00018/IMG00287/Users/cmg/Desktop/Project/C9/DICOMDAT/SDY00000/SRS00019/IMG00000Abort
>> trap: 6
>>
>> I think I have to anonymise my data before being able to send it over the
>> Internet. I checked this only happens on OSX and not on my Ubuntu machine.
>> All the best
>> Dora
>>
>> On Thu, Apr 28, 2016 at 4:19 PM, Cordes, Jonas <
>> j.cor...@dkfz-heidelberg.de> wrote:
>>
>>> Hello Dora,
>>>
>>> I could not reproduce the crash on my system (10.11.3). I think the
>>> problem may be related to the DICOM-datum. I can try to help you, if you
>>> could permit me access to the data.
>>> In general it is hard to help, if we do not get specific information
>>> about the problem.
>>>
>>> Best regards,
>>> Jonas Cordes
>>>
>>>
>>> > On 28 Apr 2016, at 14:25, Admin Uniapp <contactuni...@gmail.com>
>>> wrote:
>>> >
>>> > Hi Everyone,
>>> >
>>> > A strange crash happens when I try to use the DICOM plugin and load a
>>> DICOM into the viewer. The application crashes and quits. I first
>>> experienced this problem when I started building my working linux code on
>>> Mac but then I gave up and just waited for the new release of MITK
>>> (2016.3.0) to see if the problem is fixed in the new release, as I thought
>>> it might be something to do with the different compiler used on OSX. The
>>> crash still happens on El Capitan 10.11.4.
>>> >
>>> > Thanks
>>> > Dora
>>> >
>>> >
>>> >
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>>
>
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