Dear Demet, Sorry for the very late reply. I think in the current master there is no out of the box way to do that. You could play with the volume visualization view or e.g. create a separate surface mesh for each parcel, which probably both is not really feasible. I added that as a feature request (https://phabricator.mitk.org/T25501).
As a workaround you could use the 2017.7 installer (http://mitk.org/wiki/MitkDiffusion#Downloads). In this version the 3D visualization of RGB images is still available, which means you can simply create an RGB image from your parcellation in the “Network Operations” view and the result will be visualized in 3D. Peter Von: Demet Yuksel Dal <demetyuksel1...@gmail.com> Gesendet: Donnerstag, 20. September 2018 09:43 An: mitk-users@lists.sourceforge.net Betreff: [mitk-users] Fwd: 3d visualization We are working on a project which generate brain parcels we want to visualize them in 3D. We developed our own plugin in mitk and we can see colorful images on 2D. However we could not visualize correctly them in 3D. we want to achieve similar to below the image. can you guide me how to do that? Best Regards, Demet Yuksel Dal Electrical & Electronics Engineering Dept. Bogazici University, Istanbul, Turkey
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