Hi Peter,

Ok thanks for your help.

Furthermore, which IVIM model does MITK use to calculate the IVIM parameters? 
Is it a biexponential model?

Thanks
Adam

________________________________
Od: Neher, Peter <p.ne...@dkfz-heidelberg.de>
Odesláno: pondělí 17. února 2020 11:57
Komu: Adam Rytina <adam.ryt...@outlook.cz>; mitk-users@lists.sourceforge.net 
<mitk-users@lists.sourceforge.net>
Předmět: AW: How to save IVIM curver and parametric maps?


Hi Adam,


looks like I misunderstood your question, sorry. Unfortunately, both 
functionalities are currently not available as far as I know. I will forward 
this as feature requests.


Peter



________________________________
Von: Adam Rytina <adam.ryt...@outlook.cz>
Gesendet: Montag, 17. Februar 2020 10:05
An: Neher, Peter; mitk-users@lists.sourceforge.net
Betreff: Re: How to save IVIM curver and parametric maps?

Hello Peter,

thanks a lot for your answer.

I have a 3D parametric map and I´d like to save just one 2D slice in the image 
format. Is it possible? Moreover, I would need to add a color scale to the 
parametric map (to determine this point higlighted with this color represents 
which value of eg. D IVIM parameter) - is it possible to add this scale to the 
map?

Yes, I can save the IVIM curve parameters but is it possible to save a whole 
IVIM curve as a image, too?

Thanks a lot
Adam

________________________________
Od: Neher, Peter <p.ne...@dkfz-heidelberg.de>
Odesláno: pondělí 17. února 2020 9:01
Komu: Adam Rytina <adam.ryt...@outlook.cz>; mitk-users@lists.sourceforge.net 
<mitk-users@lists.sourceforge.net>
Předmět: AW: How to save IVIM curver and parametric maps?


Hi Adam,


after you generate the maps (after clicking the "Generate Output Images" 
button) they will appear as images in the data manager. Simply save them like 
any other image. By default, the maps are colored with a "jet" colormap. You 
can change this via the right click context menu on the image in the data 
manager. The curve parameters can be saved to the clipboard and simply pasted 
into any other application using the button "Parameters to Clipboard".


Let me know if anything is unclear or does not work as expected.


Cheers,

Peter



---------------------------------------------------------------------------------------------------

Dr. Peter F. Neher

Division of Medical Image Computing

Scientist & Division Board Member



German Cancer Research Center (DKFZ)

Foundation under Public Law

Im Neuenheimer Feld 280

69120 Heidelberg

Germany

phone: +49 6221 42-2330

fax:      +49 6221 42-2345



p.ne...@dkfz.de

www.dkfz.de<http://www.dkfz.de/>





Management Board: Prof. Dr. Michael Baumann, Ursula Weyrich

VAT-ID No.: DE143293537

________________________________
Von: Adam Rytina <adam.ryt...@outlook.cz>
Gesendet: Samstag, 15. Februar 2020 17:33
An: mitk-users@lists.sourceforge.net
Betreff: [mitk-users] How to save IVIM curver and parametric maps?


Hello all,



I´m running an IVIM analysis and I don´t know how to save an IVIM curve and f, 
D and D* parametric maps? Please, how to save the IVIM curve and parametric 
maps? Is there any way how to add a color scale to the parametric maps as well?



Thanks a lot

Regards

Adam




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