Dear Morphemetricians-


I am working on developing a project involving 3D landmark data of
primate crania with which I plan to run a series of geometric
morphometric analyses. Additionally, in order to make my analysis
comparable to previous analyses, I would like to extract some
traditional morphometric data from my landmark dataset. I am also
planning to designate semilandmark curves using .ply files constructed
from 3D point clouds. But my problem is that many of my measurements and
the placement of my curves require that I establish a sagittal plane for
my entire point configuration. So I have two questions:



1)    How would I go about rotating my entire landmark configuration so
that the sagittal plane (as designated by a number of midline landmarks)
lies along a single axis within the coordinate system? I understand from
previous postings how to manually rotate my configuration by 90 degrees,
but is there any way to designate that particular points are in the
sagittal plane and that those points are along the x, y, or z axis? Are
there any programs that this can be done with and then the rotated
landmarks coordinates exported? I have been successful using Geomagic to
rotate configurations, but then the exported coordinates are completely
unordered, which makes them essentially useless.



2)      Does anyone know of any programs that can be used with 3D data
to extract traditional morphometric data other than simple distances
between landmarks? Specifically, I?m looking to measure the angulation
of structures against particular planes and also to measure distances as
projected onto a particular plane. I?m sure that this could
alternatively be done in Excel using multiple complicated algorithms and
formulae, but I?m afraid I?m not that mathematically savvy.



Thanks so much for your assistance.



Claire E. Terhune

Ph.D. Student
Institute of Human Origins

School of Human Evolution and Social Change
Box 872402
Arizona State University
Tempe, AZ 85287-2402
[EMAIL PROTECTED]


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