Dear Jay,
the text file, as in the link you provided and copied to a text
editor, contained a mixture of double spaces and tabs. For instance,
already in the first line you have a tab between the ID and the first
coordinate but two spaces between the first and the second coordinate.
Transforming it to just tabs gives me a file that I can open in
MorphoJ (see attachment).
I hope this helps,
Carmelo
Jay Devine <[email protected]> ha scritto:
Hello, morphometrics community!
I have been trying to import a set of 3D landmarks generated in
Landmark Editor into MorphoJ. Unfortunately, MorphoJ is having a
hard time recognizing the file.
The error message I usually get goes as follows:
The number of lines with data: 0
is not the same as
the number of lines in the file: 24.
Check for empty lines in the data file (lines with just spaces or tab
stops, commas, etc.).
Another possible reason are text entries other than just the identifier
(classifiers must be imported from a separate file).
It seems like the program can not recognize my landmark data for
some reason. I have made sure that every value is tab-separated, so
I am not sure what is wrong. In addition, I have tried using commas
to separate my values, and I have tried removing scientific notation
(even though Klingenberg's guide says it is perfectly fine to use).
Here is a link to the data I'm using if you guys have time to take a
peek: http://textuploader.com/5cbx8
The format looks a bit strange on there, but if you copy and paste
the values into notepad it looks fine.
Thank you so much, in advance, for your time and help.
Jay
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NP743F 2.7826988e+001 1.2373236e+002 8.0533258e+002 3.1943138e+001
1.3673395e+002 8.1580353e+002 1.7265701e+001 1.3429872e+002 7.9437695e+002
1.2818111e+001 1.3600449e+002 7.8245886e+002 4.8344917e+001 1.3695609e+002
8.2124213e+002 3.5336891e+001 1.2775404e+002 7.9681201e+002 2.1978477e+001
1.1627573e+002 7.9611090e+002 3.4814217e+001 1.4557973e+002 7.8010278e+002
2.3085680e+001 1.4887016e+002 7.9521021e+002 4.4295250e+001 1.4355661e+002
7.9386426e+002 3.3886688e+001 1.4530602e+002 8.1331885e+002 5.6020599e+001
1.4387912e+002 8.1044006e+002
NP301M 4.5620728e-001 6.9425400e+001 8.0141583e+002 5.4913330e+000
8.3091423e+001 8.0831348e+002 -9.9645309e+000 7.7325432e+001 7.8965454e+002
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8.1515863e+002 -3.4623718e+000 6.6013275e+001 7.8753815e+002 5.2797089e+000
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7.8941150e+002 6.6685891e+000 9.0963966e+001 8.0515497e+002 2.4624598e+001
8.8921684e+001 8.0260901e+002
NP249F -3.5087891e+000 6.8961517e+001 8.0052972e+002 -1.8463974e+000
8.2192993e+001 8.1088104e+002 -9.5408173e+000 7.4394707e+001 7.8764960e+002
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7.9333478e+002 2.9530144e-001 9.1278915e+001 8.0681946e+002 1.8882383e+001
9.0653732e+001 8.0865082e+002
NP248F 5.1288605e+000 -8.7091019e+001 7.8995001e+002 -2.8275299e+000
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2.1688499e+001 -1.0664723e+002 8.1317883e+002 -4.6516228e+000 -9.5386749e+001
7.6205298e+002 1.7502426e+001 -7.7447197e+001 8.0022607e+002 1.8675446e+001
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1.0592249e+001 -1.1373569e+002 7.9756805e+002 2.2300182e+001 -1.0844306e+002
7.7310809e+002 -1.3357821e+000 -1.0984053e+002 7.7937219e+002 8.6929626e+000
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NP246M 1.8274155e+000 1.4089882e+002 7.7875909e+002 8.6824036e+000
1.5441203e+002 7.8491943e+002 -8.3138504e+000 1.5258864e+002 7.6666754e+002
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7.9149512e+002 -3.5585022e+000 1.3135515e+002 7.6487561e+002 8.9874191e+000
1.4314792e+002 7.6586499e+002 3.2951097e+000 1.6381271e+002 7.4706635e+002
-5.9950628e+000 1.6666068e+002 7.6728607e+002 2.0598507e+001 1.6025404e+002
7.6155798e+002 9.7267284e+000 1.6653752e+002 7.8246783e+002 3.6247704e+001
1.6005130e+002 7.7520544e+002
NP244F 1.1555191e+001 1.3121252e+002 7.9891309e+002 1.9270798e+001
1.4912022e+002 8.0794434e+002 3.6103821e-001 1.4302718e+002 7.9015479e+002
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8.0710718e+002 2.5305939e+000 1.2776866e+002 7.8794086e+002 1.5857132e+001
1.3824153e+002 7.8993970e+002 1.2087324e+001 1.5661833e+002 7.7341132e+002
2.1501658e+000 1.5551472e+002 7.9252441e+002 2.6213379e+001 1.5627654e+002
7.8533685e+002 1.8891998e+001 1.5685519e+002 8.0401990e+002 3.8897148e+001
1.5494164e+002 7.9228302e+002
NP241F 2.3564125e+001 -8.4364281e+001 8.0138098e+002 1.7341621e+001
-9.8826889e+001 7.9289014e+002 3.2584053e+001 -9.9307915e+001 8.1483380e+002
4.0499676e+001 -9.9948677e+001 8.2249811e+002 1.4688477e+001 -9.7089531e+001
7.7440283e+002 3.4570068e+001 -7.9147926e+001 8.1019360e+002 3.5443832e+001
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3.1267414e+001 -1.0991194e+002 8.0844623e+002 4.0112873e+001 -1.0568349e+002
7.8700488e+002 1.7780262e+001 -1.0472182e+002 7.9259656e+002 2.8604099e+001
-1.0303893e+002 7.7144635e+002
NP239M 8.2563896e+000 -1.0871898e+002 8.1869183e+002 1.5729576e+001
-1.1943491e+002 8.1182233e+002 -2.8679886e+000 -1.1794263e+002 8.2588428e+002
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8.1169263e+002 6.2831116e-001 -1.0506137e+002 8.2933044e+002 1.1603352e+001
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1.5089073e+000 -1.3223685e+002 8.2776990e+002 2.1996319e+001 -1.2799580e+002
8.3209766e+002 1.8092434e+001 -1.2672981e+002 8.1411841e+002 3.4022476e+001
-1.2569785e+002 8.2315759e+002
NP235F 2.7664330e+001 -8.8219154e+001 8.1089429e+002 2.2243843e+001
-1.0080256e+002 8.0381061e+002 3.7349213e+001 -9.6679512e+001 8.2319196e+002
4.5727654e+001 -9.7334877e+001 8.3249792e+002 2.1291660e+001 -1.0318022e+002
7.8716705e+002 3.7436249e+001 -8.1786537e+001 8.1997430e+002 3.8800026e+001
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3.8027294e+001 -1.1309805e+002 8.2267841e+002 4.5626431e+001 -1.1098690e+002
8.0018298e+002 2.6580198e+001 -1.1450235e+002 8.0499957e+002 3.6393547e+001
-1.1044421e+002 7.8483813e+002
NP233F 1.3423203e+001 1.5068224e+002 7.8948486e+002 9.4100418e+000
1.6668974e+002 7.7836401e+002 1.9830780e+001 1.6583765e+002 8.0194995e+002
2.5325790e+001 1.6762279e+002 8.1301379e+002 -5.6658859e+000 1.6479019e+002
7.7053333e+002 1.7203522e+001 1.4766400e+002 8.0267468e+002 4.6518784e+000
1.5603833e+002 7.9764331e+002 -3.8821220e-002 1.7587289e+002 8.1194739e+002
1.6102865e+001 1.7706761e+002 7.9810150e+002 -7.3004279e+000 1.7137869e+002
7.9659326e+002 7.0208683e+000 1.7282819e+002 7.8019385e+002 -1.4920320e+001
1.7167484e+002 7.8329919e+002
NP230M 2.8603180e+001 1.6482933e+002 7.9862280e+002 3.9137543e+001
1.7869081e+002 8.0596265e+002 1.7732231e+001 1.8099467e+002 7.8803125e+002
8.4622345e+000 1.8299738e+002 7.7836597e+002 5.8493195e+001 1.7804370e+002
8.0986829e+002 2.1442413e+001 1.5723557e+002 7.8671082e+002 3.6010414e+001
1.7026636e+002 7.8719586e+002 3.2452114e+001 1.9559094e+002 7.6937744e+002
2.2524525e+001 1.9672607e+002 7.9020410e+002 4.7964783e+001 1.9013509e+002
7.8269067e+002 4.0070961e+001 1.9118466e+002 8.0510065e+002 6.4212166e+001
1.8533759e+002 7.9486890e+002
NP220F 1.1403458e+001 -8.3067894e+001 8.3379407e+002 3.8894844e+000
-9.2599686e+001 8.3080615e+002 1.9768791e+001 -8.6556641e+001 8.4491998e+002
2.7649879e+001 -8.4967751e+001 8.4719971e+002 9.3229675e-001 -9.0641388e+001
8.1954858e+002 2.0162445e+001 -7.6150208e+001 8.3725708e+002 1.8863701e+001
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2.1287018e+001 -9.4388519e+001 8.4615814e+002 1.7636770e+001 -9.4689201e+001
8.2420941e+002 5.7913017e+000 -1.0014172e+002 8.2881921e+002 8.7511139e+000
-9.7354782e+001 8.1635492e+002
NP199M 1.6597351e+001 1.3742290e+002 7.8374182e+002 2.4603531e+001
1.4779424e+002 7.8886981e+002 6.7493134e+000 1.4786658e+002 7.7193805e+002
-3.2803345e+000 1.4863673e+002 7.6043201e+002 3.9302811e+001 1.4740344e+002
8.0551917e+002 8.8224335e+000 1.2882393e+002 7.7223138e+002 2.5755661e+001
1.3796368e+002 7.7404639e+002 2.3876934e+001 1.5983905e+002 7.5301648e+002
1.0608007e+001 1.6429068e+002 7.7155353e+002 3.8498493e+001 1.5692918e+002
7.7026331e+002 2.6185190e+001 1.6305795e+002 7.9045087e+002 5.2095863e+001
1.5701959e+002 7.8633301e+002
NP198M 1.6732403e+001 -1.2500184e+002 8.0848920e+002 2.5414505e+001
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1.1031418e+000 -1.3128825e+002 7.9262384e+002 2.9404202e+001 -1.3605734e+002
8.3606506e+002 7.9581299e+000 -1.1766793e+002 8.0247797e+002 9.3715286e+000
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1.0516731e+001 -1.4590608e+002 8.0235669e+002 3.1063459e+000 -1.4323273e+002
8.2423419e+002 2.5351460e+001 -1.4303503e+002 8.1829626e+002 1.5331532e+001
-1.4194588e+002 8.3974261e+002
NP194F -1.5712334e+001 7.5165009e+001 7.9165930e+002 -1.3145386e+001
8.8129990e+001 8.0201697e+002 -2.7358894e+001 8.3440567e+001 7.8004266e+002
-2.8006660e+001 8.0704445e+001 7.7253699e+002 -2.8922501e+000 8.8573051e+001
8.0672748e+002 -1.8930000e+001 7.0007668e+001 7.8084583e+002 -1.1881935e+001
8.0874870e+001 7.8463086e+002 -1.6896761e+001 9.2502342e+001 7.7075604e+002
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7.8157574e+002 -1.2947051e+001 9.2985519e+001 8.0009363e+002 1.1916580e+000
9.3323547e+001 7.9912433e+002
NP182M 3.9907379e+000 1.3052094e+002 7.7181067e+002 1.1669281e+001
1.4294351e+002 7.8049951e+002 -5.8387299e+000 1.3872401e+002 7.6084357e+002
-1.6057755e+001 1.3976532e+002 7.4388635e+002 2.9453186e+001 1.4388811e+002
7.8883276e+002 1.1581696e+001 1.3324467e+002 7.6160590e+002 -2.6444244e+000
1.1781954e+002 7.5868909e+002 8.5307522e+000 1.5328175e+002 7.4123853e+002
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7.5632129e+002 1.2750402e+001 1.5767331e+002 7.7633838e+002 3.6568451e+001
1.5321277e+002 7.7127765e+002
NP180F 1.2965973e+001 5.9856224e+001 8.0245557e+002 1.6191566e+001
7.2362122e+001 8.1086292e+002 4.5739899e+000 6.8939957e+001 7.9042896e+002
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8.1784491e+002 6.2243805e+000 5.4560356e+001 7.9017480e+002 1.7188362e+001
6.3652760e+001 7.9213983e+002 1.8253448e+001 8.2328369e+001 7.7396857e+002
6.5507278e+000 8.7460114e+001 7.9008331e+002 2.9878284e+001 8.0731438e+001
7.8867523e+002 1.8319794e+001 8.4064224e+001 8.0747009e+002 3.9916183e+001
8.2429893e+001 8.0416028e+002
NP179M 1.1191467e+001 1.2764721e+002 7.7711768e+002 2.1028534e+001
1.3903378e+002 7.8247076e+002 3.2714081e+000 1.3431194e+002 7.6665479e+002
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7.9156677e+002 2.2455292e+001 1.2751759e+002 7.6715198e+002 9.3608627e+000
1.1743458e+002 7.6712787e+002 1.5568018e+001 1.4436064e+002 7.4560345e+002
2.9948645e+000 1.4777399e+002 7.6556451e+002 3.0799549e+001 1.4752074e+002
7.6072845e+002 2.0504219e+001 1.5161958e+002 7.8283398e+002 4.6060921e+001
1.4964748e+002 7.7755890e+002
NP164M 2.8837654e+001 1.3837265e+002 8.1661902e+002 3.7543587e+001
1.4901549e+002 8.2495422e+002 1.7125046e+001 1.5199312e+002 8.1007721e+002
6.5673141e+000 1.5304549e+002 7.9923792e+002 6.0006744e+001 1.4817603e+002
8.2740576e+002 1.7714951e+001 1.3422557e+002 8.0508942e+002 3.4896694e+001
1.4053407e+002 8.0663379e+002 3.0977097e+001 1.6743198e+002 7.9253522e+002
2.2017742e+001 1.6603990e+002 8.1277234e+002 4.5456272e+001 1.6003351e+002
8.0274518e+002 3.9666134e+001 1.6135245e+002 8.2637762e+002 6.1954353e+001
1.5711620e+002 8.1478821e+002
NP158F 1.4485794e+001 -1.6495187e+002 8.3498511e+002 7.8461609e+000
-1.7701762e+002 8.2880402e+002 2.1626495e+001 -1.7269853e+002 8.5040533e+002
3.0022415e+001 -1.7279150e+002 8.5546997e+002 1.1094025e+001 -1.8109175e+002
8.1125525e+002 2.4143997e+001 -1.5778783e+002 8.4286102e+002 2.5909134e+001
-1.6791492e+002 8.3365826e+002 4.0237709e+001 -1.8356584e+002 8.4112762e+002
2.1571594e+001 -1.8788533e+002 8.4749011e+002 3.1717510e+001 -1.8587630e+002
8.2775891e+002 1.0893156e+001 -1.8625732e+002 8.2956714e+002 2.2155771e+001
-1.8720259e+002 8.1213611e+002
NP155F 3.3059338e+001 -8.8841370e+001 8.0966687e+002 2.6133854e+001
-1.0106909e+002 8.0824579e+002 4.3317364e+001 -9.4979935e+001 8.2237610e+002
5.2055893e+001 -9.6944931e+001 8.3223120e+002 2.2158493e+001 -1.0526350e+002
7.9051288e+002 4.2809280e+001 -8.2444748e+001 8.1788208e+002 4.2577530e+001
-9.1331085e+001 8.0528546e+002 6.0946606e+001 -1.0830043e+002 8.1268951e+002
4.3140900e+001 -1.1003129e+002 8.2134906e+002 4.9541248e+001 -1.0922811e+002
7.9928497e+002 2.8970497e+001 -1.0987008e+002 8.0845129e+002 3.5551247e+001
-1.1423642e+002 7.8743475e+002
NP146M -2.1053776e+001 -2.1567751e+002 7.8424225e+002 -1.4771858e+001
-2.3030400e+002 7.7661725e+002 -3.5900913e+001 -2.2645068e+002 7.9237152e+002
-4.4848274e+001 -2.3350003e+002 8.0216187e+002 3.1743393e+000 -2.3164069e+002
7.7756116e+002 -3.0029682e+001 -2.1137831e+002 7.9477209e+002 -1.8355947e+001
-2.2272359e+002 7.9703644e+002 -2.6244911e+001 -2.4233270e+002 8.1188293e+002
-3.3360573e+001 -2.4266838e+002 7.9128778e+002 -1.0142113e+001 -2.4017397e+002
8.0091956e+002 -1.5008196e+001 -2.4007037e+002 7.7815442e+002 5.6945820e+000
-2.4129488e+002 7.9080951e+002
NP117M 1.8243481e+001 6.2655254e+001 7.9374902e+002 2.4355541e+001
7.4870407e+001 8.0316235e+002 5.4868813e+000 7.0968346e+001 7.8250330e+002
-7.6025009e+000 7.3331902e+001 7.7093805e+002 4.3491272e+001 7.4443649e+001
8.0566254e+002 6.2205200e+000 5.3591896e+001 7.8357092e+002 2.2197075e+001
6.3653072e+001 7.8122736e+002 1.8604158e+001 8.4740051e+001 7.6131409e+002
6.7744522e+000 8.8610924e+001 7.8227411e+002 3.3846031e+001 8.3095856e+001
7.7604950e+002 2.5396200e+001 8.7500664e+001 7.9759253e+002 4.8865662e+001
8.5845108e+001 7.8907483e+002
NP112F 8.5406265e+000 1.5317883e+002 7.7245752e+002 1.3788719e+001
1.6868025e+002 7.7968903e+002 -2.0145874e+000 1.6144250e+002 7.5845734e+002
-6.4890251e+000 1.5863593e+002 7.4749133e+002 2.6986050e+001 1.6560301e+002
7.8972882e+002 3.9379807e+000 1.4426163e+002 7.5941791e+002 1.5253059e+001
1.5361707e+002 7.6108868e+002 1.5410255e+001 1.7405806e+002 7.4105890e+002
-2.2961330e-001 1.7696049e+002 7.5787598e+002 2.6738728e+001 1.7625783e+002
7.5723535e+002 1.3527451e+001 1.8110941e+002 7.7495062e+002 3.6461838e+001
1.8002364e+002 7.7332471e+002
NP102M 2.2133583e+001 -8.9057617e+001 8.2291095e+002 1.2941933e+001
-1.0212092e+002 8.1835327e+002 3.1100891e+001 -9.5927887e+001 8.4019580e+002
4.2830631e+001 -9.3947044e+001 8.4898547e+002 7.4848213e+000 -1.0562054e+002
8.0026135e+002 3.1952682e+001 -9.2977470e+001 8.1903870e+002 3.4734600e+001
-8.1135727e+001 8.3145673e+002 5.2084656e+001 -1.1257351e+002 8.2825128e+002
3.0827641e+001 -1.1355527e+002 8.3839252e+002 3.8121243e+001 -1.1284522e+002
8.1169318e+002 1.5846889e+001 -1.1493132e+002 8.1896350e+002 2.4075188e+001
-1.1503500e+002 7.9552734e+002
