Hi Andrea,
The code you provided works for me and I am using R 3.2.2, geiger 2.0.6
and ape_4.0.
However, ensure that the gegier is loaded in the R environment or ensure
that other packages with the same function name do not possibly
interfere with geiger (see this post:
http://stackoverflow.com/questions/5564564/r-2-functions-with-the-same-name-in-2-different-packages).
What might happen here is that when you called rescale function, R used
rescale function from some other (loaded) packages (from different
namespaces...). Try to run the new R session and load just geiger (with
dependencies) using library (geiger) command, check the rescale function
by getAnywhere("rescale") command and if rescale is called from the
geiger (<environment: namespace:geiger>) you will likely get an expected
output (without error).
There is a shorter way as well. Load geiger and just type
geiger::rescale().
Marko
On 2016-12-06 10:19, andrea cardini wrote:
Dear All,
I've just tried the rescale function in geiger on my data and got an
error message. As I have no experience with it, I tried the first
example for this function in the help: same error message (see below).
Has anyone had similar issues? Probably I made some silly mistake.
Thanks in advance for your feedback.
Cheers
Andrea
geo <- get(data(geospiza))
ltrns <- rescale(geo$phy, "lambda")
plot(ltrns(0))
title("lambda: 0.0")
Error message:
Error in rescale(as.numeric(x, range = range, domain = domain, ...)) :
(list) object cannot be coerced to type 'double'
--
Dr. Andrea Cardini
Researcher, Dipartimento di Scienze Chimiche e Geologiche, Università
di Modena e Reggio Emilia, Via Campi, 103 - 41125 Modena - Italy
tel. 0039 059 2058472
Adjunct Associate Professor, School of Anatomy, Physiology and Human
Biology, The University of Western Australia, 35 Stirling Highway,
Crawley WA 6009, Australia
E-mail address: [email protected], [email protected]
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