try

SELECT * from geno_260k WHERE ident IN (SELECT ident FROM geno_260k WHERE a1=0
GROUP BY ident HAVING count(a1)>250000);

This will give you what you're deleting first.. then if that is good. do


DELETE FROM geno_260k WHERE ident IN (SELECT ident FROM geno_260k WHERE a1=0
GROUP BY ident HAVING count(a1)>250000);

(note the change in case is just my way of seeing things.. it's not necessary that I know of)


----- Original Message ----- From: "Olaf Stein" <[EMAIL PROTECTED]>
To: "MySql" <mysql@lists.mysql.com>
Sent: Wednesday, September 05, 2007 9:35 AM
Subject: Delete query question


Hey all

I am stuck here (thinking wise) and need some ideas:

I have this table:

CREATE TABLE `geno_260k` (
 `genotype_id` int(10) unsigned NOT NULL auto_increment,
 `ident` int(10) unsigned NOT NULL,
 `marker_id` int(10) unsigned NOT NULL,
 `a1` tinyint(3) unsigned NOT NULL,
 `a2` tinyint(3) unsigned NOT NULL default '0',
 PRIMARY KEY  (`genotype_id`),
 KEY `ident` (`ident`),
 KEY `marker_id` (`marker_id`),
 CONSTRAINT `geno_260k_ibfk_2` FOREIGN KEY (`marker_id`) REFERENCES
`markers` (`marker_id`),
 CONSTRAINT `geno_260k_ibfk_1` FOREIGN KEY (`ident`) REFERENCES
`individual` (`ident`)
) ENGINE=InnoDB AUTO_INCREMENT=91318273 DEFAULT CHARSET=utf8


And with the following query I get 159 ident's back:

select ident from geno_260k where a1=0 group by ident having
count(a1)>250000;

I want to delete all records containing those idents (about 260000 per ident
so 159*260000).
So I thought

delete from geno_260k where ident=(select ident from geno_260k where a1=0
group by ident having count(a1)>250000);

But mysql can not select and delete from the same table.

Any ideas?

Thanks
Olaf



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