Jerry is correct you are better off using the pre-packaged installer from the 
MySQL distro
for the most part you are downloading (binaries) from some site
creating a MYSQL_HOME environment variable to point to home folder for MySQL
unzipping/uncompressing the distro to the MYSQL_HOME folder
make links to %MYSQL_HOME%\bin\mysqld (mysql daemon) and 
%MYSQL_HOME%\bin\mysql (command line interface) and copy them to 
%ALLUSERSPROFILE%
(would be helpful to work in a editor for my.cnf)

Martin 
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> From: jschwa...@the-infoshop.com
> To: gro...@bcconsultingservices.com; mgai...@hotmail.com
> CC: manishsinha.t...@gmail.com; mysql@lists.mysql.com
> Subject: RE: What files to install for Windows
> Date: Mon, 29 Dec 2008 10:06:15 -0500
> 
> I'm late to the game, but many Windows installers run the actual installer
> for required applications. Have your application's installer run the normal
> installation package for MySQL.
> 
> That's all I can give you, my knowledge of installers is too old to be of
> real use.
> 
> Regards,
>  
> Jerry Schwartz
> The Infoshop by Global Information Incorporated
> 195 Farmington Ave.
> Farmington, CT 06032
>  
> 860.674.8796 / FAX: 860.674.8341
>  
> www.the-infoshop.com
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> www.etudes-marche.com
> 
> 
> 
> 
> 
> 
> 
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