Btw. just got the info that it is fixed and will be part of 2.0.4
https://github.com/neo4j/neo4j/commit/37371aa (Thanks Jake!)
Michael
Am 17.06.2014 um 14:55 schrieb Michael Hunger
<michael.hun...@neotechnology.com>:
> This is a know issue which is currently worked on,
>
> can you delete the logical log files of the lucene index after your upgrade?
>
> that means
>
> rm graph.db/index/lucene.log.*
>
> and you _might_ need to create a transaction against an index, like creating
> an index and deleting it again, e.g. from java code or the shell.
>
> db.index().forNodex("foo").delete()
>
>
>
> Thanks a lot
>
> Michael
>
> Am 17.06.2014 um 09:59 schrieb Mamta Thakur <ghazal.ma...@gmail.com>:
>
>> Hi,
>>
>> I have been trying to upgrade neo4j from 1.9.3 to 2.0.3. SDN from
>> 2.3.1.RELEASE to 3.1.0.RELEASE.
>>
>> Followed the steps listed @
>> http://docs.neo4j.org/chunked/stable/deployment-upgrading.html#explicit-upgrade
>> I try bringing up the server with the upgrade configuration.There are a few
>> new folders created in the db store. One among which is upgrade_backup and
>> messages log there says upgrade happened.
>>
>> 2014-06-17 07:16:55.286+0000 INFO [o.n.k.i.DiagnosticsManager]: ---
>> INITIALIZED diagnostics END ---
>> 2014-06-17 07:17:00.216+0000 INFO [o.n.k.i.n.s.StoreFactory]: Starting
>> upgrade of database store files
>> 2014-06-17 07:17:00.225+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 10% complete
>> 2014-06-17 07:17:00.228+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 20% complete
>> 2014-06-17 07:17:00.231+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 30% complete
>> 2014-06-17 07:17:00.233+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 40% complete
>> 2014-06-17 07:17:00.236+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 50% complete
>> 2014-06-17 07:17:00.239+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 60% complete
>> 2014-06-17 07:17:00.241+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 70% complete
>> 2014-06-17 07:17:00.244+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 80% complete
>> 2014-06-17 07:17:00.247+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 90% complete
>> 2014-06-17 07:17:00.249+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store upgrade
>> 100% complete
>> 2014-06-17 07:17:03.776+0000 INFO [o.n.k.i.n.s.StoreFactory]: Finished
>> upgrade of database store files
>>
>> But I get the error with log/index.
>>
>> Exception when stopping
>> org.neo4j.index.impl.lucene.LuceneDataSource@42a792f0
>> org.neo4j.kernel.impl.tran
>> saction.xaframework.IllegalLogFormatException: Invalid log format version
>> found, expected 3 but was 2. To be able to upgrade from an older log format
>> version there must have been a clean shutdown of the database
>> java.lang.RuntimeException:
>> org.neo4j.kernel.impl.transaction.xaframework.IllegalLogFormatException:
>> Invalid log format version found, expected 3 but wa
>> s 2. To be able to upgrade from an older log format version there must have
>> been a clean shutdown of the database
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy$1.reached(LogPruneStrategies.java:250)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$AbstractPruneStrategy.prune(LogPruneStrategies.java:78)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy.prune(LogPruneStrategies.java:222)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.close(XaLogicalLog.java:742)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:69)
>> at
>> org.neo4j.index.impl.lucene.LuceneDataSource.stop(LuceneDataSource.java:310)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.shutdown(LifeSupport.java:547)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.remove(LifeSupport.java:339)
>> at
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.unregisterDataSource(XaDataSourceManager.java:272)
>> at
>> org.neo4j.index.lucene.LuceneKernelExtension.stop(LuceneKernelExtension.java:92)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.extension.KernelExtensions.stop(KernelExtensions.java:124)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.shutdown(LifeSupport.java:185)
>> at
>> org.neo4j.kernel.InternalAbstractGraphDatabase.shutdown(InternalAbstractGraphDatabase.java:801)
>> at
>> org.springframework.data.neo4j.support.DelegatingGraphDatabase.shutdown(DelegatingGraphDatabase.java:270)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>> at java.lang.reflect.Method.invoke(Unknown Source)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.invokeCustomDestroyMethod(DisposableBeanAdapter.java:327)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.destroy(DisposableBeanAdapter.java:253)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:510)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:486)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingleton(DefaultListableBeanFactory.java:742)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:455)
>> at
>> org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:1090)
>> at
>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:487)
>> at
>> org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:389)
>> at
>> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:294)
>> at
>> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:112)
>> at
>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4206)
>> at
>> org.apache.catalina.core.StandardContext.start(StandardContext.java:4705)
>> at
>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
>> at
>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
>> at
>> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601)
>> at
>> org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:943)
>> at
>> org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:778)
>> at
>> org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:504)
>> at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)
>> at
>> org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)
>> at
>> org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
>> at
>> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)
>> at org.apache.catalina.core.StandardHost.start(StandardHost.java:840)
>> at
>> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
>> at
>> org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
>> at
>> org.apache.catalina.core.StandardService.start(StandardService.java:525)
>> at
>> org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
>> at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>> at java.lang.reflect.Method.invoke(Unknown Source)
>> at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
>> at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
>> Caused by:
>> org.neo4j.kernel.impl.transaction.xaframework.IllegalLogFormatException:
>> Invalid log format version found, expected 3 but was 2. To be able t
>> o upgrade from an older log format version there must have been a clean
>> shutdown of the database
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogIoUtils.readLogHeader(LogIoUtils.java:70)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.getFirstStartRecordTimestamp(XaLogicalLog.java:1704)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy$1.reached(LogPruneStrategies.java:246)
>> ... 57 more
>>
>> Does anyone have any idea on how to fix this? Also tried upgrading to the
>> latest version(2.1.2) but results with the same error.
>>
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