i took the following approach to troubleshooting the situation. Instead of running the command ./koch pdf
or pdflatex doc/manual.tex i tried the following steps cd doc latex manual.tex dvips manual.dvi ps2pdf manual.pdf as the interim command of dvips executed it highlighted some issues with the font. The rendered postscript file when viewed, displayed some of the content of the page. This meant the missing fonts were not embedded/rendered in the document. at this point in time, the question raised was, "is there a problem with the latex fonts installed on arch linux" ?