You could write a wrapper around node's main SQLite module<https://github.com/mapbox/node-sqlite3>to make it conform to the WebSQL API, but I doubt you'll get a lot of traction from others, as WebSQL is deprecated<http://www.w3.org/TR/webdatabase/#status-of-this-document>in favor of IndexedDB <http://www.w3.org/TR/IndexedDB/>.
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