Wenhai created ASTERIXDB-1413:
---------------------------------
Summary: Massive parallel operators will pose a "tempory file not
found error"
Key: ASTERIXDB-1413
URL: https://issues.apache.org/jira/browse/ASTERIXDB-1413
Project: Apache AsterixDB
Issue Type: Bug
Components: Hyracks
Environment: Linux ubuntu 12.04, 24 cores + 128GB memory
2NCs X 12 partitions with 10GB per NC
Reporter: Wenhai
Assignee: Jianfeng Jia
When we use the fuzzyjoin patch in the context of three-way fuzzyjoin, the
following error will "ALMOST" always arise.
Patch link:
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https://asterix-gerrit.ics.uci.edu/#/c/531/
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Dataset
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http://yun.baidu.com/share/link?shareid=2678954841&uk=4030601168
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Schema
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drop dataverse test if exists;
create dataverse test;
use dataverse test;
create type PaperType as open {
tid:uuid,
title: string,
authors: string?,
year: int?,
conf: string?,
idx: string,
abstract: string?
}
create dataset ACM(PaperType) primary key tid autogenerated;
use dataverse test;
drop dataset ACM if exists;
create dataset ACM(PaperType) primary key tid autogenerated;
load dataset ACM
using localfs
(("path"="127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/acm_split.aa,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/acm_split.ab,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/acm_split.ac,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/acm_split.ad,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/acm_split.ae"),("format"="delimited-text"),("delimiter"="#"),("quote"="\u0000"));
use dataverse test;
create dataset OUTPUT(PaperType) primary key tid autogenerated;
load dataset OUTPUT
using localfs
(("path"="127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.aa,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.ab,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.ac,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.ad,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.ae,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.af,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/outputacm_raw.ag"),("format"="delimited-text"),("delimiter"="#"),("quote"="\u0000"));
use dataverse test;
create dataset DBLP(PaperType) primary key tid autogenerated;
load dataset DBLP
using localfs
(("path"="127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.aa,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.ab,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.ac,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.ad,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.ae,127.0.0.1:///home/hadoop/Downloads/doccorpus/reproduce/dblp_split.af"),("format"="delimited-text"),("delimiter"="#"),("quote"="\u0000"));
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Query
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use dataverse test;
set import-private-functions 'true'
set simthreshold '.99f';
let $s := sum(
for $t in dataset ('ACM')
for $o in dataset('DBLP')
for $g in dataset('OUTPUT')
where word-tokens($o.authors) ~= word-tokens($t.authors) and
word-tokens($t.authors) ~= word-tokens($g.authors)
order by $o.id
return 1)
return $s
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Error message
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/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory) [FileNotFoundException]
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Tracing information
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org.apache.hyracks.api.exceptions.HyracksException: Job failed on account of:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.cc.job.JobRun.waitForCompletion(JobRun.java:211)
at
org.apache.hyracks.control.cc.work.WaitForJobCompletionWork$1.run(WaitForJobCompletionWork.java:48)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.common.utils.ExceptionUtils.setNodeIds(ExceptionUtils.java:45)
at org.apache.hyracks.control.nc.Task.run(Task.java:319)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:218)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.initialize(SuperActivityOperatorNodePushable.java:83)
at org.apache.hyracks.control.nc.Task.run(Task.java:263)
... 3 more
Caused by: java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:212)
... 5 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:230)
at
org.apache.hyracks.algebricks.runtime.operators.std.EmptyTupleSourceRuntimeFactory$1.close(EmptyTupleSourceRuntimeFactory.java:60)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$1.initialize(AlgebricksMetaOperatorDescriptor.java:116)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.lambda$initialize$0(SuperActivityOperatorNodePushable.java:83)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:205)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:202)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:81)
at
org.apache.hyracks.dataflow.common.io.RunFileReader.open(RunFileReader.java:47)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.applyInMemHashJoin(OptimizedHybridHashJoinOperatorDescriptor.java:670)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.joinPartitionPair(OptimizedHybridHashJoinOperatorDescriptor.java:489)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.close(OptimizedHybridHashJoinOperatorDescriptor.java:426)
at
org.apache.hyracks.algebricks.runtime.operators.base.AbstractOneInputOneOutputOneFramePushRuntime.close(AbstractOneInputOneOutputOneFramePushRuntime.java:57)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$2.close(AlgebricksMetaOperatorDescriptor.java:153)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:227)
... 9 more
Caused by: java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.io.RandomAccessFile.open0(Native Method)
at java.io.RandomAccessFile.open(RandomAccessFile.java:316)
at java.io.RandomAccessFile.<init>(RandomAccessFile.java:243)
at org.apache.hyracks.control.nc.io.FileHandle.open(FileHandle.java:70)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:79)
... 16 more
org.apache.hyracks.api.exceptions.HyracksException: Job failed on account of:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.cc.job.JobRun.waitForCompletion(JobRun.java:211)
at
org.apache.hyracks.control.cc.work.WaitForJobCompletionWork$1.run(WaitForJobCompletionWork.java:48)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.common.utils.ExceptionUtils.setNodeIds(ExceptionUtils.java:45)
at org.apache.hyracks.control.nc.Task.run(Task.java:319)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:218)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.initialize(SuperActivityOperatorNodePushable.java:83)
at org.apache.hyracks.control.nc.Task.run(Task.java:263)
... 3 more
Caused by: java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:212)
... 5 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:230)
at
org.apache.hyracks.algebricks.runtime.operators.std.EmptyTupleSourceRuntimeFactory$1.close(EmptyTupleSourceRuntimeFactory.java:60)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$1.initialize(AlgebricksMetaOperatorDescriptor.java:116)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.lambda$initialize$0(SuperActivityOperatorNodePushable.java:83)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:205)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:202)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:81)
at
org.apache.hyracks.dataflow.common.io.RunFileReader.open(RunFileReader.java:47)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.applyInMemHashJoin(OptimizedHybridHashJoinOperatorDescriptor.java:670)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.joinPartitionPair(OptimizedHybridHashJoinOperatorDescriptor.java:489)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.close(OptimizedHybridHashJoinOperatorDescriptor.java:426)
at
org.apache.hyracks.algebricks.runtime.operators.base.AbstractOneInputOneOutputOneFramePushRuntime.close(AbstractOneInputOneOutputOneFramePushRuntime.java:57)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$2.close(AlgebricksMetaOperatorDescriptor.java:153)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:227)
... 9 more
Caused by: java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.io.RandomAccessFile.open0(Native Method)
at java.io.RandomAccessFile.open(RandomAccessFile.java:316)
at java.io.RandomAccessFile.<init>(RandomAccessFile.java:243)
at org.apache.hyracks.control.nc.io.FileHandle.open(FileHandle.java:70)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:79)
... 16 more
Apr 24, 2016 12:01:39 PM org.apache.asterix.api.http.servlet.APIServlet doPost
SEVERE: Job failed on account of:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
org.apache.hyracks.api.exceptions.HyracksException: Job failed on account of:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.cc.job.JobRun.waitForCompletion(JobRun.java:211)
at
org.apache.hyracks.control.cc.work.WaitForJobCompletionWork$1.run(WaitForJobCompletionWork.java:48)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.control.common.utils.ExceptionUtils.setNodeIds(ExceptionUtils.java:45)
at org.apache.hyracks.control.nc.Task.run(Task.java:319)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:218)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.initialize(SuperActivityOperatorNodePushable.java:83)
at org.apache.hyracks.control.nc.Task.run(Task.java:263)
... 3 more
Caused by: java.util.concurrent.ExecutionException:
org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.runInParallel(SuperActivityOperatorNodePushable.java:212)
... 5 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:230)
at
org.apache.hyracks.algebricks.runtime.operators.std.EmptyTupleSourceRuntimeFactory$1.close(EmptyTupleSourceRuntimeFactory.java:60)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$1.initialize(AlgebricksMetaOperatorDescriptor.java:116)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable.lambda$initialize$0(SuperActivityOperatorNodePushable.java:83)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:205)
at
org.apache.hyracks.api.rewriter.runtime.SuperActivityOperatorNodePushable$1.call(SuperActivityOperatorNodePushable.java:202)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
... 3 more
Caused by: org.apache.hyracks.api.exceptions.HyracksDataException:
java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:81)
at
org.apache.hyracks.dataflow.common.io.RunFileReader.open(RunFileReader.java:47)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.applyInMemHashJoin(OptimizedHybridHashJoinOperatorDescriptor.java:670)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.joinPartitionPair(OptimizedHybridHashJoinOperatorDescriptor.java:489)
at
org.apache.hyracks.dataflow.std.join.OptimizedHybridHashJoinOperatorDescriptor$ProbeAndJoinActivityNode$1.close(OptimizedHybridHashJoinOperatorDescriptor.java:426)
at
org.apache.hyracks.algebricks.runtime.operators.base.AbstractOneInputOneOutputOneFramePushRuntime.close(AbstractOneInputOneOutputOneFramePushRuntime.java:57)
at
org.apache.hyracks.algebricks.runtime.operators.meta.AlgebricksMetaOperatorDescriptor$2.close(AlgebricksMetaOperatorDescriptor.java:153)
at
org.apache.hyracks.storage.am.common.dataflow.IndexSearchOperatorNodePushable.close(IndexSearchOperatorNodePushable.java:227)
... 9 more
Caused by: java.io.FileNotFoundException:
/home/hadoop/asterixdb/hadoop/node1/io2/./RelS1188720785205710895.waf (No such
file or directory)
at java.io.RandomAccessFile.open0(Native Method)
at java.io.RandomAccessFile.open(RandomAccessFile.java:316)
at java.io.RandomAccessFile.<init>(RandomAccessFile.java:243)
at org.apache.hyracks.control.nc.io.FileHandle.open(FileHandle.java:70)
at org.apache.hyracks.control.nc.io.IOManager.open(IOManager.java:79)
... 16 more
Apr 24, 2016 12:01:49 PM
org.apache.hyracks.control.common.dataset.ResultStateSweeper sweep
{noformat}
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