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Pei Chen edited comment on CTAKES-48 at 6/17/13 2:29 PM: --------------------------------------------------------- Douglas, Could you clarify which xml descriptor were using that caused this error? The temp work around is to add in your xml: Similar to what was done in in (https://issues.apache.org/jira/browse/CTAKES-208) <typeSystemDescription> <imports> <import name="org.apache.ctakes.typesystem.types.TypeSystem"/> </imports> </typeSystemDescription> was (Author: chenpei): Douglas, The error looks slightly different- The original one had edu.mayo references and was missed during re-factoring. However, the fix should be fairly straight forward. Could you clarify which xml descriptor were using that caused this error? The temp work around is to add in your xml: Similar to what was done in in (https://issues.apache.org/jira/browse/CTAKES-208) <typeSystemDescription> <imports> <import name="org.apache.ctakes.typesystem.types.TypeSystem"/> </imports> </typeSystemDescription> > negation annotator - Sentence type used in code not in descr > ------------------------------------------------------------ > > Key: CTAKES-48 > URL: https://issues.apache.org/jira/browse/CTAKES-48 > Project: cTAKES > Issue Type: Improvement > Reporter: Pei Chen > Priority: Minor > > Found at the SHARPn summit/f2f: > tried to run the negation annotator by itself and this error was thrown: > Caused by: org.apache.uima.cas.CASRuntimeException: JCas type > "edu.mayo.bmi.uima.core.type.textspan.Sentence" used in Java code, but was > not declared in the XML type descriptor. > at org.apache.uima.jcas.impl.JCasImpl.getType(JCasImpl.java:412) > at org.apache.uima.jcas.impl.JCasImpl.getCasType(JCasImpl.java:436) > at org.apache.uima.jcas.impl.JCasImpl.getAnnotationIndex(JCasImpl.java:1531) > at edu.mayo.bmi.uima.context.ContextAnnotator.process(ContextAnnotator.java:2 -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators For more information on JIRA, see: http://www.atlassian.com/software/jira