See <https://builds.apache.org/job/ctakes-trunk-compiletest/458/changes>
Changes: [chenpei] CTAKES-200 - Update Test Case for new sectionizer ------------------------------------------ [...truncated 5134 lines...] [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/main/java/org/apache/ctakes/drugner/fsm/machines/elements/DurationFSM.java>:[169,18] [unchecked] unchecked call to add(E) as a member of the raw type java.util.Set [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/main/java/org/apache/ctakes/drugner/fsm/machines/elements/DurationFSM.java>:[170,18] [unchecked] unchecked call to add(E) as a member of the raw type java.util.Set [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/main/java/org/apache/ctakes/drugner/fsm/machines/elements/DurationFSM.java>:[171,18] [unchecked] unchecked call to add(E) as a member of the raw type java.util.Set [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/main/java/org/apache/ctakes/drugner/fsm/machines/elements/DurationFSM.java>:[172,18] [unchecked] unchecked call to add(E) as a member of the raw type java.util.Set [INFO] [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-drug-ner --- Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-drug-ner --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] [INFO] --- jcasgen-maven-plugin:0.9.3:generate (default) @ ctakes-drug-ner --- [INFO] JCasGen: Output going to '<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/target/generated-sources/jcasgen'> [INFO] JCasGen: Reading the XML TAE descriptor, and creating types, for xml input file '<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml'.> [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.ChunkAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.ChunkAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DecimalStrengthAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DosagesAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DosagesAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DrugMentionAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DurationAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.DurationAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FormAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FormAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FractionStrengthAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FrequencyAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FrequencyAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FrequencyUnitAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.RangeStrengthAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.RouteAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.RouteAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.StrengthAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.StrengthAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.StrengthUnitAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.SubSectionAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.SubSectionAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.SuffixStrengthAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation'. [INFO] JCasGen: Replacing: 'org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type'. [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-drug-ner --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-drug-ner --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/src/test/resources> [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-drug-ner --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-drug-ner --- [INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-drug-ner/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES Resources side-effect 3.1.2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-side-effect-res --- [INFO] [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-side-effect-res --- [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-side-effect-res --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 6 resources [INFO] Copying 3 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-side-effect-res --- [INFO] No sources to compile [INFO] [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-side-effect-res --- [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-side-effect-res --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 6 resources [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-side-effect-res --- [INFO] No sources to compile [INFO] [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-side-effect-res --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-side-effect-res/src/test/resources> [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-side-effect-res --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-side-effect-res --- [INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-side-effect-res/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES Side Effects 3.1.2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-side-effect --- [INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-side-effect/target> [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Apache cTAKES ..................................... SUCCESS [34.770s] [INFO] Apache cTAKES common type system .................. SUCCESS [21.645s] [INFO] Apache cTAKES utils ............................... SUCCESS [13.589s] [INFO] Apache cTAKES Resources core ...................... SUCCESS [10.712s] [INFO] Apache cTAKES core ................................ SUCCESS [40.106s] [INFO] Apache cTAKES Resources pos-tagger ................ SUCCESS [11.876s] [INFO] Apache cTAKES part-of-speech tagger ............... SUCCESS [24.178s] [INFO] Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [8.638s] [INFO] Apache cTAKES chunker ............................. SUCCESS [14.134s] [INFO] Apache cTAKES document preprocessor ............... SUCCESS [13.856s] [INFO] Apache cTAKES Resources dictionary-lookup ......... SUCCESS [7.505s] [INFO] Apache cTAKES dictionary lookup ................... SUCCESS [40.672s] [INFO] Apache cTAKES context dependent tokenizer ......... SUCCESS [28.857s] [INFO] Apache cTAKES Resources lvg ....................... SUCCESS [10.185s] [INFO] Apache cTAKES LVG lexical tools ................... SUCCESS [32.672s] [INFO] Apache cTAKES Resources ne-contexts ............... SUCCESS [8.660s] [INFO] Apache cTAKES named entity contexts ............... SUCCESS [11.268s] [INFO] Apache cTAKES Resources constituency-parser ....... SUCCESS [7.576s] [INFO] Apache cTAKES Constituency Parser ................. SUCCESS [11.218s] [INFO] Apache cTAKES Resources coreference ............... SUCCESS [5.750s] [INFO] Apache cTAKES Resources relation-extractor ........ SUCCESS [8.077s] [INFO] Apache cTAKES Resources dependency-parser ......... SUCCESS [11.244s] [INFO] Apache cTAKES Dependency Parser ................... SUCCESS [52.252s] [INFO] Apache cTAKES Relation Extractor .................. SUCCESS [17.820s] [INFO] Apache cTAKES CoReference Resolver ................ SUCCESS [14.176s] [INFO] Apache cTAKES Resources drug-ner .................. SUCCESS [7.759s] [INFO] Apache cTAKES Drug NER ............................ SUCCESS [12.428s] [INFO] Apache cTAKES Resources side-effect ............... SUCCESS [6.383s] [INFO] Apache cTAKES Side Effects ........................ FAILURE [11.954s] [INFO] Apache cTAKES Resources smoking-status ............ SKIPPED [INFO] Apache cTAKES Smoking Status ...................... SKIPPED [INFO] Apache cTAKES Resources pad-term-spotter-res ...... SKIPPED [INFO] Apache cTAKES Pad Term Spotter .................... SKIPPED [INFO] Apache cTAKES Resources assertion ................. SKIPPED [INFO] Apache cTAKES Resources assertion-zoner ........... SKIPPED [INFO] Apache cTAKES Assertion's zoner ................... SKIPPED [INFO] Apache cTAKES Assertion ........................... SKIPPED [INFO] Apache cTAKES Resources temporal .................. SKIPPED [INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED [INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED [INFO] Apache cTAKES Distribution ........................ SKIPPED [INFO] Apache cTAKES Regression-test ..................... SKIPPED [INFO] Apache cTAKES template filler ..................... SKIPPED [INFO] ctakes-examples ................................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2:33:58.942s [INFO] Finished at: Thu Dec 05 02:13:52 UTC 2013 [INFO] Final Memory: 33M/154M [INFO] ------------------------------------------------------------------------ [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled Waiting for Jenkins to finish collecting data[ERROR] Failed to execute goal org.apache.maven.plugins:maven-clean-plugin:2.4.1:clean (default-clean) on project ctakes-side-effect: Failed to clean project: Failed to delete /home/hudson/jenkins-slave/workspace/ctakes-trunk-compiletest/ctakes-side-effect/target/generated-sources/jcasgen/org/apache/ctakes/typesystem/type/relation/ManifestationOfTextRelation_Type.java -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <goals> -rf :ctakes-side-effect Sending e-mails to: [email protected] [email protected] [email protected] Sending e-mails to: [email protected] [email protected] channel stopped
