See <https://builds.apache.org/job/ctakes-trunk-compiletest/603/changes>
Changes:
[clin] check in the best performing i2b2 settings so far.
Applied system-events to within-sent ee,et and event-sectionTime.
TLINK:
Precision : 0.6973
Recall : 0.6673
Average P&R : 0.6857
F measure : 0.6820
------------------------------------------
[...truncated 800 lines...]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-utils
---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @
ctakes-utils ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/src/main/resources>
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-utils
---
[INFO] Compiling 30 source files to
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/target/classes>
[WARNING]
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/src/main/java/org/apache/ctakes/utils/wiki/WikiIndex.java>:[92,28]
[deprecation] open(Directory) in IndexReader has been deprecated
[WARNING]
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/src/main/java/org/apache/ctakes/utils/wiki/WikiIndex.java>:[293,60]
[deprecation] LUCENE_30 in Version has been deprecated
[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-utils
---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @
ctakes-utils ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/src/main/resources>
[INFO] Copying 3 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-utils
---
[INFO] Nothing to compile - all classes are up to date
[INFO]
[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @
ctakes-utils ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/src/test/resources>
[INFO] Copying 3 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @
ctakes-utils ---
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[INFO]
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-utils ---
[INFO] Surefire report directory:
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-utils/target/surefire-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Results :
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0
[JENKINS] Recording test results
[JENKINS] Archiving disabled
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Resources core 3.2.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-core-res ---
[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @
ctakes-core-res ---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @
ctakes-core-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 16 resources
[INFO] Copying 3 resources
[INFO]
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ctakes-core-res ---
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[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @
ctakes-core-res ---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @
ctakes-core-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 16 resources
[INFO] Copying 3 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @
ctakes-core-res ---
[INFO] No sources to compile
[INFO]
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ctakes-core-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core-res/src/test/resources>
[INFO] Copying 3 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @
ctakes-core-res ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-core-res
---
[INFO] Surefire report directory:
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core-res/target/surefire-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Results :
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0
[JENKINS] Recording test results
[JENKINS] Archiving disabled
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES core 3.2.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[WARNING] The POM for jwnl:jwnl:jar:1.3.3 is invalid, transitive dependencies
(if any) will not be available, enable debug logging for more details
[INFO]
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-core ---
[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-core ---
[WARNING] Invalid POM for jwnl:jwnl:jar:1.3.3, transitive dependencies (if any)
will not be available, enable debug logging for more details
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @
ctakes-core ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/main/resources>
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-core ---
[INFO] Compiling 143 source files to
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/target/classes>
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR :
[INFO] -------------------------------------------------------------
[ERROR] error: error reading
/home/jenkins/jenkins-slave/maven-repositories/1/jwnl/jwnl/1.3.3/jwnl-1.3.3.jar;
error in opening zip file
[INFO] 1 error
[INFO] -------------------------------------------------------------
[JENKINS] Archiving disabled
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ..................................... SUCCESS [3.800s]
[INFO] Apache cTAKES common type system .................. SUCCESS [12.274s]
[INFO] Apache cTAKES utils ............................... SUCCESS [3.350s]
[INFO] Apache cTAKES Resources core ...................... SUCCESS [1.259s]
[INFO] Apache cTAKES core ................................ FAILURE [3.430s]
[INFO] Apache cTAKES Resources pos-tagger ................ SKIPPED
[INFO] Apache cTAKES part-of-speech tagger ............... SKIPPED
[INFO] Apache cTAKES Resources ctakes-chunker-res ........ SKIPPED
[INFO] Apache cTAKES chunker ............................. SKIPPED
[INFO] Apache cTAKES document preprocessor ............... SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup ......... SKIPPED
[INFO] Apache cTAKES dictionary lookup ................... SKIPPED
[INFO] Apache cTAKES context dependent tokenizer ......... SKIPPED
[INFO] Apache cTAKES Resources lvg ....................... SKIPPED
[INFO] Apache cTAKES LVG lexical tools ................... SKIPPED
[INFO] Apache cTAKES Resources ne-contexts ............... SKIPPED
[INFO] Apache cTAKES named entity contexts ............... SKIPPED
[INFO] Apache cTAKES Resources constituency-parser ....... SKIPPED
[INFO] Apache cTAKES Constituency Parser ................. SKIPPED
[INFO] Apache cTAKES Resources coreference ............... SKIPPED
[INFO] Apache cTAKES Resources relation-extractor ........ SKIPPED
[INFO] Apache cTAKES Resources dependency-parser ......... SKIPPED
[INFO] Apache cTAKES Dependency Parser ................... SKIPPED
[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................ SKIPPED
[INFO] Apache cTAKES Resources drug-ner .................. SKIPPED
[INFO] Apache cTAKES Drug NER ............................ SKIPPED
[INFO] Apache cTAKES Resources side-effect ............... SKIPPED
[INFO] Apache cTAKES Side Effects ........................ SKIPPED
[INFO] Apache cTAKES Resources smoking-status ............ SKIPPED
[INFO] Apache cTAKES Smoking Status ...................... SKIPPED
[INFO] Apache cTAKES Resources assertion ................. SKIPPED
[INFO] Apache cTAKES Assertion ........................... SKIPPED
[INFO] Apache cTAKES Resources assertion-zoner ........... SKIPPED
[INFO] Apache cTAKES Assertion's zoner ................... SKIPPED
[INFO] Apache cTAKES Resources temporal .................. SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ........... SKIPPED
[INFO] Apache cTAKES YTEX ................................ SKIPPED
[INFO] Apache cTAKES YTEX UIMA ........................... SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res SKIPPED
[INFO] Apache cTAKES dictionary lookup fast .............. SKIPPED
[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED
[INFO] Apache cTAKES YTEX Web ............................ SKIPPED
[INFO] Apache cTAKES Distribution ........................ SKIPPED
[INFO] Apache cTAKES Regression-test ..................... SKIPPED
[INFO] Apache cTAKES template filler ..................... SKIPPED
[INFO] ctakes-examples ................................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 36.028s
[INFO] Finished at: Tue Nov 18 15:26:43 UTC 2014
[INFO] Final Memory: 37M/439M
[INFO] ------------------------------------------------------------------------
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Waiting for Jenkins to finish collecting data[ERROR] Failed to execute goal
org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on
project ctakes-core: Compilation failure
[ERROR] error: error reading
/home/jenkins/jenkins-slave/maven-repositories/1/jwnl/jwnl/1.3.3/jwnl-1.3.3.jar;
error in opening zip file
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e
switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please
read the following articles:
[ERROR] [Help 1]
http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <goals> -rf :ctakes-core
Sending e-mails to: [email protected]
channel stopped
