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https://issues.apache.org/jira/browse/CTAKES-368?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
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britt fitch closed CTAKES-368.
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Resolution: Fixed
tested and its working great.
> Allow alternate CUI formats in fast dictionary lookup module
> ------------------------------------------------------------
>
> Key: CTAKES-368
> URL: https://issues.apache.org/jira/browse/CTAKES-368
> Project: cTAKES
> Issue Type: Improvement
> Components: ctakes-dictionary-lookup
> Affects Versions: 3.2.2
> Reporter: britt fitch
> Assignee: Sean Finan
> Fix For: 3.2.3
>
>
> The current fast lookup using a BSV parses the first field as “C” and up to 7
> numerals, padding with “0" as needed to reach that length when applicable
> [see CuiCodeUtil.getCuiCode(String)]
> The CUI string is then substring’d from 1 to len and parsed as a Long.
> This is producing issues with other related, but separate, ontologies
> (MedGen) where the bulk of concepts use UMLS CUIs but some additional
> concepts were created by the NCBI where no CUI previously existed.
> These MedGen-specific concepts are created with a prefix “CN” + 6 numerals,
> resulting in “N123456” failing to produce a Long.
> It is preferred to allow alternative CUI formats.
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