Ok, it's more complicated. This is what I've figured out:
nssbackup checks for a running instance and does not start if an instance is 
already running. However, during this start attempt the lock file of the first 
instance is removed. A long running backup task does not recognize this (I 
guess a full backup of your 60 GB would take 5..10 hours). Therefore, later 
executions by cron are sucessful because no lock file is present.


** Changed in: nssbackup
       Status: Incomplete => Confirmed

** Changed in: nssbackup
     Assignee: (unassigned) => Jean-Peer Lorenz (peer.loz)

** Changed in: nssbackup
    Milestone: None => release0.2

-- 
nssbackup does not prevent itself from running in parallel.
https://bugs.launchpad.net/bugs/573733
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