Hi there!
I just tried setting up a new installation using numpy 1.8.1rc1 (+scipy
0.13.3 and matplotlib 1.3.1). I ran into problems when installing
matplotlib 1.3.1. The attached logfile shows the full log, but it ends with:
src/_png.cpp:329:15: error: 'npy_PyFile_Dup' was not declared in this scope
if ((fp = npy_PyFile_Dup(py_file, "rb")))
^
src/_png.cpp:577:13: error: 'npy_PyFile_DupClose' was not declared in
this scope
if (npy_PyFile_DupClose(py_file, fp)) {
^
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
The problem went away (and matplotlib installed cleanly) when I re-did
the whole shebang using numpy 1.8.0, so I suspect this was caused by
something in the rc.
Cheers
Thomas
On 2014-03-03 17:23, Charles R Harris wrote:
Hi All,
Julian Taylor has put windows binaries and sources for the 1.8.1
release candidate up on sourceforge
<http://sourceforge.net/projects/numpy/files/NumPy/1.8.1rc1/>. If
things go well, it will taken to a full release in a week or so.
Chuck
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$ OPT='-march=native' python setup.py install
============================================================================
Edit setup.cfg to change the build options
BUILDING MATPLOTLIB
matplotlib: yes [1.3.1]
python: yes [2.7.5+ (default, Feb 27 2014, 19:37:08) [GCC
4.8.1]]
platform: yes [linux2]
REQUIRED DEPENDENCIES AND EXTENSIONS
numpy: yes [version 1.8.1rc1]
dateutil: yes [using dateutil version 1.5]
tornado: yes [using tornado version 2.4.1]
pyparsing: yes [using pyparsing version 2.0.1]
pycxx: yes [Couldn't import. Using local copy.]
libagg: yes [pkg-config information for 'libagg' could not
be found. Using local copy.]
freetype: yes [version 16.1.10]
png: yes [version 1.2.49]
OPTIONAL SUBPACKAGES
sample_data: yes [installing]
toolkits: yes [installing]
tests: yes [using nose version 1.3.0]
OPTIONAL BACKEND EXTENSIONS
macosx: no [Mac OS-X only]
qt4agg: yes [installing, Qt: 4.8.4, PyQt4: 4.10.3]
gtk3agg: yes [installing, version 3.6.8]
gtk3cairo: yes [installing, version 3.6.8]
gtkagg: yes [installing, Gtk: 2.24.20 pygtk: 2.24.0]
tkagg: no [The C/C++ header for Tk (tk.h) could not be
found. You may need to install the development
package.]
wxagg: yes [installing, version 2.8.12.1]
gtk: yes [installing, Gtk: 2.24.20 pygtk: 2.24.0]
agg: yes [installing]
cairo: yes [installing, version 1.8.8]
windowing: no [Microsoft Windows only]
OPTIONAL LATEX DEPENDENCIES
dvipng: yes [version 1.14]
ghostscript: yes [version 9.10]
latex: yes [version 3.1415926]
pdftops: yes [version 0.24.1]
running install
Checking .pth file support in /usr/local/lib/python2.7/dist-packages/
/usr/bin/python -E -c pass
TEST PASSED: /usr/local/lib/python2.7/dist-packages/ appears to support .pth
files
running bdist_egg
running egg_info
writing requirements to lib/matplotlib.egg-info/requires.txt
writing lib/matplotlib.egg-info/PKG-INFO
writing namespace_packages to lib/matplotlib.egg-info/namespace_packages.txt
writing top-level names to lib/matplotlib.egg-info/top_level.txt
writing dependency_links to lib/matplotlib.egg-info/dependency_links.txt
reading manifest file 'lib/matplotlib.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'lib/matplotlib.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
copying lib/matplotlib/mpl-data/matplotlibrc ->
build/lib.linux-x86_64-2.7/matplotlib/mpl-data
running build_ext
building 'matplotlib._png' extension
x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -march=native -fPIC
-DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib__png_ARRAY_API -DPYCXX_ISO_CPP_LIB=1
-I/usr/local/lib/python2.7/dist-packages/numpy/core/include
-I/usr/local/include -I/usr/include -I. -I/usr/include/libpng12
-I/usr/include/python2.7 -c src/_png.cpp -o
build/temp.linux-x86_64-2.7/src/_png.o
In file included from
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
from
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from src/_png.cpp:28:
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
warning: #warning "Using deprecated NumPy API, disable it by " "#defining
NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^
src/_png.cpp:147:51: error: macro "npy_PyFile_Dup" requires 3 arguments, but
only 2 given
if ((fp = npy_PyFile_Dup(py_file, (char *)"wb")))
^
src/_png.cpp:243:48: error: macro "npy_PyFile_DupClose" requires 3 arguments,
but only 2 given
if (npy_PyFile_DupClose(py_file, fp)) {
^
src/_png.cpp:264:44: error: macro "npy_PyFile_DupClose" requires 3 arguments,
but only 2 given
if (npy_PyFile_DupClose(py_file, fp)) {
^
src/_png.cpp:329:43: error: macro "npy_PyFile_Dup" requires 3 arguments, but
only 2 given
if ((fp = npy_PyFile_Dup(py_file, "rb")))
^
src/_png.cpp:577:44: error: macro "npy_PyFile_DupClose" requires 3 arguments,
but only 2 given
if (npy_PyFile_DupClose(py_file, fp)) {
^
In file included from src/file_compat.h:4:0,
from src/_png.cpp:31:
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_3kcompat.h:
In function ‘PyObject* npy_PyFile_OpenFile(PyObject*, const char*)’:
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_3kcompat.h:288:60:
warning: deprecated conversion from string constant to ‘char*’
[-Wwrite-strings]
return PyObject_CallFunction(open, "Os", filename, mode);
^
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_3kcompat.h:
In function ‘int npy_PyFile_CloseFile(PyObject*)’:
/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_3kcompat.h:296:50:
warning: deprecated conversion from string constant to ‘char*’
[-Wwrite-strings]
ret = PyObject_CallMethod(file, "close", NULL);
^
src/_png.cpp: In member function ‘Py::Object _png_module::write_png(const
Py::Tuple&)’:
src/_png.cpp:147:15: error: ‘npy_PyFile_Dup’ was not declared in this scope
if ((fp = npy_PyFile_Dup(py_file, (char *)"wb")))
^
src/_png.cpp:243:17: error: ‘npy_PyFile_DupClose’ was not declared in this scope
if (npy_PyFile_DupClose(py_file, fp)) {
^
src/_png.cpp:264:13: error: ‘npy_PyFile_DupClose’ was not declared in this scope
if (npy_PyFile_DupClose(py_file, fp)) {
^
src/_png.cpp: In member function ‘PyObject* _png_module::_read_png(const
Py::Object&, bool, int)’:
src/_png.cpp:329:15: error: ‘npy_PyFile_Dup’ was not declared in this scope
if ((fp = npy_PyFile_Dup(py_file, "rb")))
^
src/_png.cpp:577:13: error: ‘npy_PyFile_DupClose’ was not declared in this scope
if (npy_PyFile_DupClose(py_file, fp)) {
^
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
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