I would suggest

%matplotlib notebook

It will still have to a nice png, but you get an interactive figure when it is live.

Amazing, thanks. I was using mpld3 for this.
(for some strange reason I need to put %matplotlib notebook before each plot)

The recommendation of inverting a permutation by argsort'ing it, while it works, is suboptimal, as it takes O(n log(n)) time, and you can do it in linear time:
Actually, there is (later in post) a linear solution using bincount, but your code is definitely better. Thanks!
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