Yikes, I have never seen this error before. Did you manually install a version of Capn Proto yourself? If so, perhaps you could uninstall it and try again? --------- Matt Taylor OS Community Flag-Bearer Numenta
On Mon, Mar 30, 2015 at 12:10 AM, Giuseppe Torre <[email protected]> wrote: > Hi Matthew, > I am using os x 10.9 > I have run in shell the command: export MACOSX_DEPLOYMENT_TARGET=10.9 > Now it worked! No more CLANG error! Thanks! > However, now I get other errors after a while... > They are all error compiling Cython files.... > I am copying only a few lines from the error below. (Thank you all for the > help!) > > Compiling capnp/lib/capnp.pyx because it depends on > /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/Cython-0.22-py2.7-macosx-10.6-intel.egg/Cython/Includes/libcpp/__init__.pxd. > > Cythonizing capnp/lib/capnp.pyx > > > Error compiling Cython file: > > ------------------------------------------------------------ > > ... > > cdef _init(self, capnp.DynamicEnum other, object parent): > > self.thisptr = other > > self._parent = parent > > return self > > > cpdef _as_str(self) except +reraise_kj_exception: > > ^ > ..... etc etc.... > > > > > File > "/Users/giuseppetorre/nupic-darwin64/lib/python2.7/site-packages/setuptools-1.0-py2.7.egg/setuptools/sandbox.py", > line 69, in run_setup > > File > "/Users/giuseppetorre/nupic-darwin64/lib/python2.7/site-packages/setuptools-1.0-py2.7.egg/setuptools/sandbox.py", > line 120, in run > > File > "/Users/giuseppetorre/nupic-darwin64/lib/python2.7/site-packages/setuptools-1.0-py2.7.egg/setuptools/sandbox.py", > line 71, in <lambda> > > File "setup.py", line 122, in <module> > > optionsDesc.append( > > File > "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/Cython-0.22-py2.7-macosx-10.6-intel.egg/Cython/Build/Dependencies.py", > line 865, in cythonize > > cythonize_one(*args[1:]) > > File > "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/Cython-0.22-py2.7-macosx-10.6-intel.egg/Cython/Build/Dependencies.py", > line 985, in cythonize_one > > raise CompileError(None, pyx_file) > > Cython.Compiler.Errors.CompileError: capnp/lib/capnp.pyx > > > > /G > > > > > On Mon, Mar 30, 2015 at 3:44 AM, Matthew Taylor <[email protected]> wrote: >> >> I think your clang error is because of the `MACOSX_DEPLOYMENT_TARGET` >> environment variable. What version of OS X are you running? What is >> the value of "echo $MACOSX_DEPLOYMENT_TARGET" in your shell? >> >> It needs to be 10.7 or higher. >> >> --------- >> Matt Taylor >> OS Community Flag-Bearer >> Numenta >> >> >> On Sun, Mar 29, 2015 at 2:50 PM, Giuseppe Torre <[email protected]> >> wrote: >> > Yes Env done and echo $NUPIC provides /Users/giuseppe/nupic indeed. >> > >> > I tried the following: >> > >> > ARCHFLAGS="-arch x86_64";python setup.py install --user >> > >> > gives this: >> > File "setup.py", line 635, in <module> >> > raise Exception("To build NuPIC in OS X, you must " >> > Exception: To build NuPIC in OS X, you must `export ARCHFLAGS="-arch >> > x86_64"`. >> > >> > >> > ARCHFLAGS="-arch x86_64" python setup.py install --user (...no >> > semicolon) >> > >> > gives CLANG error... >> > >> > /G >> > >> > >> > >> > >> > On Sun, Mar 29, 2015 at 11:39 PM, cogmission (David Ray) >> > <[email protected]> wrote: >> >> >> >> I think he did that? That is what he meant by, "Env done". I mentioned >> >> the >> >> "export" command a few emails back... >> >> >> >> To be sure Giuseppe try running: "echo $NUPIC" and see if it outputs >> >> the >> >> correct directory (or nothing if it wasn't exported correctly) >> >> >> >> On Sun, Mar 29, 2015 at 4:27 PM, David Wood <[email protected]> >> >> wrote: >> >>> >> >>> Hi Giuseppe, >> >>> >> >>> Try this process, with the addition I’ve made: >> >>> >> >>> - download nupic-darwin64 ( https://github.com/numenta/nupic-darwin64 >> >>> ) >> >>> - saved to /User/giuseppe/ >> >>> - in terminal run: source nupic-darwin64/bin/activate ( I have not >> >>> run >> >>> make within nupic-darwin64 just activate) >> >>> - download nupic ( https://github.com/numenta/nupic ) >> >>> - saved to /User/giuseppe/ >> >>> >> >>> >> >>> - In the Terminal, run: >> >>> $ export NUPIC=/Users/giuseppe/nupic >> >>> >> >>> - in Terminal cd nupic and then ARCHFLAGS="-arch x86_64" python >> >>> setup.py >> >>> install >> >>> >> >>> >> >>> Regards, >> >>> Dave >> >>> -- >> >>> http://about.me/david_wood >> >>> >> >>> >> >>> >> >>> On Mar 29, 2015, at 17:24, Giuseppe Torre <[email protected]> >> >>> wrote: >> >>> >> >>> I see thank you! ENV done now. >> >>> here is the complete list of steps I have done and that will >> >>> eventually >> >>> lead to the CLANG error: >> >>> >> >>> - download nupic-darwin64 ( https://github.com/numenta/nupic-darwin64 >> >>> ) >> >>> - saved to /User/giuseppe/ >> >>> - in terminal run: source nupic-darwin64/bin/activate ( I have not >> >>> run >> >>> make within nupic-darwin64 just activate) >> >>> - download nupic ( https://github.com/numenta/nupic ) >> >>> - saved to /User/giuseppe/ >> >>> - in Terminal cd nupic and then ARCHFLAGS="-arch x86_64" python >> >>> setup.py >> >>> install >> >>> >> >>> At this stage, after a bit a get the CLANG error... >> >>> /G >> >>> >> >>> >> >>> >> >>> On Sun, Mar 29, 2015 at 10:55 PM, cogmission (David Ray) >> >>> <[email protected]> wrote: >> >>>> >> >>>> Mine is /Users/cogmission/git/nupic... for instance >> >>>> >> >>>> On Sun, Mar 29, 2015 at 3:55 PM, cogmission (David Ray) >> >>>> <[email protected]> wrote: >> >>>>> >> >>>>> that means do: "export NUPIC=<path to your nupic dir>" >> >>>>> >> >>>>> >> >>>>> >> >>>>> On Sun, Mar 29, 2015 at 3:49 PM, Giuseppe Torre >> >>>>> <[email protected]> wrote: >> >>>>>> >> >>>>>> Hi David, >> >>>>>> I do have Xcode 6.1.1, command line tool as well as all required >> >>>>>> stuff installed.. >> >>>>>> but I still get that CLANG error. >> >>>>>> The only step I did not do is: "Set the NUPIC environment variable >> >>>>>> to >> >>>>>> the absolute path to your local checkout of NuPIC." because I am >> >>>>>> not sure >> >>>>>> what it means...I wonder if this is cause of the Clang issue... >> >>>>>> Thanks though >> >>>>>> /G >> >>>>>> >> >>>>>> On Sun, Mar 29, 2015 at 8:46 PM, cogmission (David Ray) >> >>>>>> <[email protected]> wrote: >> >>>>>>> >> >>>>>>> Hi Giuseppe, >> >>>>>>> >> >>>>>>> I am in no way a Python/C++ NuPIC installation guru - but I would >> >>>>>>> first recommend >> >>>>>>> making sure you have both Xcode installed then make sure you >> >>>>>>> install >> >>>>>>> the "command line tools" --> >> >>>>>>> >> >>>>>>> http://osxdaily.com/2014/02/12/install-command-line-tools-mac-os-x/ >> >>>>>>> >> >>>>>>> Cheers... >> >>>>>>> >> >>>>>>> On Sun, Mar 29, 2015 at 12:39 PM, Giuseppe Torre >> >>>>>>> <[email protected]> wrote: >> >>>>>>>> >> >>>>>>>> Hello, >> >>>>>>>> I have a problem and a doubt. >> >>>>>>>> I will start with the doubt (I am a newbie so apologies in >> >>>>>>>> advance): >> >>>>>>>> In the documentation you ask : >> >>>>>>>> >> >>>>>>>> Set the NUPIC environment variable to the absolute path to your >> >>>>>>>> local checkout of NuPIC. >> >>>>>>>> >> >>>>>>>> export NUPIC=<repo-path> >> >>>>>>>> >> >>>>>>>> If you are going to run tests, you might need to add py.test to >> >>>>>>>> your >> >>>>>>>> $PATH for tests to run. This will be in different locations >> >>>>>>>> depending on >> >>>>>>>> your python environment, so we'll leave this up to you. >> >>>>>>>> >> >>>>>>>> What do you mean? What am I suppose to do? >> >>>>>>>> >> >>>>>>>> The problem: >> >>>>>>>> I have tries to compile using ARCHFLAGS="-arch x86_64" python >> >>>>>>>> setup.py install >> >>>>>>>> ....but I get the following CLANG error: >> >>>>>>>> >> >>>>>>>> building 'nupic.libcpp_region' extension >> >>>>>>>> >> >>>>>>>> clang -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes >> >>>>>>>> -Qunused-arguments -Qunused-arguments -arch x86_64 -DNUPIC2 >> >>>>>>>> -DNTA_OS_DARWIN >> >>>>>>>> -DNTA_ARCH_64 -DNTA_PYTHON_SUPPORT=2.7 -DNTA_INTERNAL >> >>>>>>>> -DNTA_ASSERTIONS_ON >> >>>>>>>> -DNTA_ASM -DHAVE_CONFIG_H -DBOOST_NO_WREGEX >> >>>>>>>> -I/Users/giuseppetorre/nupic/external/darwin64/include >> >>>>>>>> -I/Users/giuseppetorre/nupic/external/common/include >> >>>>>>>> -I/Users/giuseppetorre/nupic/extensions >> >>>>>>>> -I/Users/giuseppetorre/nupic >> >>>>>>>> >> >>>>>>>> -I/Users/giuseppetorre/nupic/extensions/core/build/release/include >> >>>>>>>> >> >>>>>>>> -I/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 >> >>>>>>>> >> >>>>>>>> -I/Users/giuseppetorre/nupic-darwin64/lib/python2.7/site-packages/numpy/core/include >> >>>>>>>> >> >>>>>>>> -I/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 >> >>>>>>>> -c >> >>>>>>>> extensions/py_support/NumpyVector.cpp -o >> >>>>>>>> >> >>>>>>>> build/temp.macosx-10.6-intel-2.7/extensions/py_support/NumpyVector.o >> >>>>>>>> -std=c++11 -m64 -fPIC -fvisibility=hidden -Wall -Wextra >> >>>>>>>> -Wreturn-type >> >>>>>>>> -Wunused -Wno-unused-parameter -mtune=generic -O2 -stdlib=libc++ >> >>>>>>>> >> >>>>>>>> clang: error: invalid deployment target for -stdlib=libc++ >> >>>>>>>> (requires >> >>>>>>>> OS X 10.7 or later) >> >>>>>>>> >> >>>>>>>> error: command 'clang' failed with exit status 1 >> >>>>>>>> >> >>>>>>>> >> >>>>>>>> Thanks in advance for your help >> >>>>>>>> >> >>>>>>>> >> >>>>>>> >> >>>>>>> >> >>>>>>> >> >>>>>>> -- >> >>>>>>> With kind regards, >> >>>>>>> >> >>>>>>> David Ray >> >>>>>>> Java Solutions Architect >> >>>>>>> >> >>>>>>> cortical.io >> >>>>>>> Sponsor of: HTM.java >> >>>>>>> >> >>>>>>> [email protected] >> >>>>>>> http://cortical.io >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>> >> >>>>> >> >>>>> >> >>>>> -- >> >>>>> With kind regards, >> >>>>> >> >>>>> David Ray >> >>>>> Java Solutions Architect >> >>>>> >> >>>>> cortical.io >> >>>>> Sponsor of: HTM.java >> >>>>> >> >>>>> [email protected] >> >>>>> http://cortical.io >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> -- >> >>>> With kind regards, >> >>>> >> >>>> David Ray >> >>>> Java Solutions Architect >> >>>> >> >>>> cortical.io >> >>>> Sponsor of: HTM.java >> >>>> >> >>>> [email protected] >> >>>> http://cortical.io >> >>> >> >>> >> >>> >> >>> >> >>> -- >> >>> >> >>> >> >> >> >> >> >> >> >> -- >> >> With kind regards, >> >> >> >> David Ray >> >> Java Solutions Architect >> >> >> >> cortical.io >> >> Sponsor of: HTM.java >> >> >> >> [email protected] >> >> http://cortical.io >> > >> > >> > >> > >> > >> > > > >
