Hello Sebastián,

Please see my answers below:

>
> 1) What do the matchingSegments and matchingCells represent?
>

I think we recently include the logic here to model "long-term depression".
That is if the segment has sufficient activity at time t, but does not
become active at time t+1, it represents a potential false prediction and
should be punished. "sufficient activity" here means number of active
inputs is above minThreshold. matchingSegments and matchingCells are used
to determine predicted but inactive cells at the next time step (see line
376 of learnOnSegments).

This logic speeds up the forgetting of false predictions, but it should be
used with caution. If your problems has multiple correct predictions, then
it is OK to have some false predictions. Generally speaking, the ratio
between permanenceIncrement and predictedSegmentDecrement determines how
many multiple predictions can the model make at any time.


> 2) minThreshold is supposed to be the minimum number of synapses a segment
> must have in order to be considered for bursting, what does it do here?
>

activationThreshold is the threshold for activation of a segment: if a
segment has more than activationThreshold number of active synapses, it
will fire a dendritic spike and depolarize the cell body.

minThreshold is typically lower than activationThreshold and is only used
in learning phase (not in inference phase). It are used in two places as
far as I know.

1. If the number of synapses active on a segment is at least this
threshold, it is selected as the best matching cell in a bursting column.
(see function bestMatchingSegment)

2. It is used to determine predicted but inactive cells and segments as
described above.


> 3) As I see it, the if also grabs the permanneces above the connected
> threshold, why is that?
>

I am not sure which "if" you are referring to here. Could you clarify your
question?

Yuwei

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