> >
> > What kind of tests do you envisage? I guess we could read from octave,
> and
> > compare with a list of known values (e.g. obtained from gdcmdump, or
> even
> > better dcmdump from dcmtk). Looks like a lot of manual work though.
> 
> hardcode what the answer should be reading various VRs, delving into
> nested SQs. In the future, if it is tinkered with, can run the suite
> of tests to make sure everything is still handled correctly. Also I
> can play with more types of file that I don't come across in my own
> work. I think I tested stuff, and inadvertently broken it again: like
> the thing you fixed near the if statement to ignore group length.
> 
> 

OK.

I had another look at the 'transpose or not' issue. Contrary to what I
thought, it seems that we're reading the data  transposed compared to
matlab, for both my PET and CT data. This is rather strange, as as far as I
know, matlab just reads the data as-is, and stores it in the usual
column-first fashion. As far as I can see, you're doing the same (i.e. just
calling gdcm::Bitmap::GetBuffer). This puzzles me. Is there anything obvious
that I'm missing? How would we transpose the image (we could call permute of
course).

Kris



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