On 18 October 2010 19:11, Craig A. James <cja...@emolecules.com> wrote: > On 10/18/10 10:43 AM, Igor Filippov [Contr] wrote: >> Craig, >> >> I got caught on this too. The problem for me was solved by this two >> lines from the Wiki: >> To run the tests, first set BABEL_DATADIR=~/src/openbabel/data and >> BABEL_LIBDIR=~/build/openbabel/lib. Then run "make test". > > Thanks, Igor. > > LD_LIBRARY_PATH was already set to the correct location, and BABEL_DATADIR > wasn't set at all. When I changed BABEL_DATADIR, all of the tests passed. > > It seems odd to me that I'd get a bunch of segfaults and glibc > double-memory-free errors just because BABEL_DATADIR wasn't set. It's > certainly counterintuitive. Shouldn't it have found BABEL_DATADIR in the > installed directory? Does BABEL_DATADIR have some default like > /usr/local/openbabel/data (which would be a seriously bad default)?
The tests aren't coded that carefully, e.g. they may not check to see whether a particular plugin was loaded before continuing. It's something to be fixed but as you can imagine, low priority right now. I'll look into the general problem though... > Either way, I'm pleased that everything is working now. > > Craig > >> >> After I set up these variables I got 100% "pass" result. >> It would be nice if this information was printed out at the end of >> "make" run. >> >> Hope this helps, >> Igor >> >> On Mon, 2010-10-18 at 13:40 -0400, Craig A. James wrote: >>> Hmmm... "make test" didn't do too well. I suspect there's some simple >>> linking problem, maybe a wrong library or something. The complete logfile >>> is attached. It looks to me like all the failures are from a single >>> problem related to memory corruption. >>> >>> make test>test.log 2>&1& >>> >>> $ uname -a >>> Linux radon 2.6.32-23-server #37-Ubuntu SMP Fri Jun 11 09:11:11 UTC >>> 2010 x86_64 GNU/Linux >>> >>> Craig >> >> >> > > > ------------------------------------------------------------------------------ > Download new Adobe(R) Flash(R) Builder(TM) 4 > The new Adobe(R) Flex(R) 4 and Flash(R) Builder(TM) 4 (formerly > Flex(R) Builder(TM)) enable the development of rich applications that run > across multiple browsers and platforms. Download your free trials today! > http://p.sf.net/sfu/adobe-dev2dev > _______________________________________________ > OpenBabel-Devel mailing list > OpenBabel-Devel@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/openbabel-devel > ------------------------------------------------------------------------------ Download new Adobe(R) Flash(R) Builder(TM) 4 The new Adobe(R) Flex(R) 4 and Flash(R) Builder(TM) 4 (formerly Flex(R) Builder(TM)) enable the development of rich applications that run across multiple browsers and platforms. Download your free trials today! http://p.sf.net/sfu/adobe-dev2dev _______________________________________________ OpenBabel-Devel mailing list OpenBabel-Devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-devel
