> I think that at some point between v 2.2.3 and the current svn trunk, the 
> result of OBAtom.GetAtomicNum() in Python changed from type 'int' to 'long'. 
> Is this an intentional change to the API that I missed,

No, OBAtom::GetAtomicNum() in C++ returns an unsigned int and that hasn't 
changed:
http://openbabel.org/api/2.3/classOpenBabel_1_1OBAtom.shtml#ade227de93fbe080fc1c2854e530df81a

What version of SWIG are you using?

Cheers,
-Geoff
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