I also note that configure thinks you are using the GNU compiler. checking whether we are using the GNU C++ compiler configure:4965: result: yes
I don't know how to debug this, but you should make sure that the directory containing all of the intel compiler stuff is at the front of the path. You may need to specify the compiler explicity with CXX_FLAGS and so forth (google for the info on specifying the compiler as I am not sure of the specifics). - Noel On 6 May 2010 09:33, Noel O'Boyle <[email protected]> wrote: > Hi Ryan, > > I see you're using Intel Compiler 10.1.018. I have compiled OB with > Intel Compiler 11.1.059 without problem (and without BOOST). Do you > have access to a newer compiler, or even to gcc? > > - Noel > > On 28 April 2010 23:34, Ryan P. Steele <[email protected]> wrote: >> Hi, folks - >> >> Having a heck of a time getting openbabel installed. I installed the boost >> libraries and finally got those errors corrected. Now I'm stuck on one that >> doesn't appear obvious (to me, at least). My C compiler (Intel icpc) is >> failing the sanity check during "configure". My config.log is attached. >> Thoughts? I have no problem compiling other programs with this compiler. >> >> Thanks - >> Ryan >> >> >> >> >> This file contains any messages produced by compilers while >> running configure, to aid debugging if configure makes a mistake. >> >> It was created by Open Babel configure 2.2.3, which was >> generated by GNU Autoconf 2.63. Invocation command line was >> >> $ ./configure >> >> ## --------- ## >> ## Platform. ## >> ## --------- ## >> >> hostname = ofer4-laptop >> uname -m = i686 >> uname -r = 2.6.24-22-generic >> uname -s = Linux >> uname -v = #1 SMP Mon Nov 24 18:32:42 UTC 2008 >> >> /usr/bin/uname -p = unknown >> /bin/uname -X = unknown >> >> /bin/arch = unknown >> /usr/bin/arch -k = unknown >> /usr/convex/getsysinfo = unknown >> /usr/bin/hostinfo = unknown >> /bin/machine = unknown >> /usr/bin/oslevel = unknown >> /bin/universe = unknown >> >> PATH: . >> PATH: /usr >> PATH: /usr/bin >> PATH: /usr/lib/qt4/bin >> PATH: /usr/local >> PATH: /usr/local/bin >> PATH: /bin >> PATH: /home/ofer4 >> PATH: /opt/intel >> PATH: /opt/intel/fc/10.1.018 >> PATH: /opt/intel/fc/10.1.018/bin >> PATH: /opt/intel/cc/10.1.018/bin >> PATH: /usr/local/texlive/2008/bin/i386-linux >> PATH: /home/ofer4/mybin >> PATH: /usr/local/Trolltech/Qt-4.6.2/bin >> PATH: /usr/local/sbin >> PATH: /usr/local/bin >> PATH: /usr/sbin >> PATH: /usr/bin >> PATH: /sbin >> PATH: /bin >> PATH: /usr/games >> PATH: /home/ofer4/qchem/bin/perl >> PATH: /home/ofer4/qchem/bin >> PATH: /home/ofer4/qchem/gbin >> PATH: /home/ofer4/qchem/exe >> PATH: /home/ofer4/qchem/util >> >> >> ## ----------- ## >> ## Core tests. ## >> ## ----------- ## >> >> configure:2174: checking for a BSD-compatible install >> configure:2242: result: /usr/bin/install -c >> configure:2253: checking whether build environment is sane >> configure:2313: result: yes >> configure:2454: checking for a thread-safe mkdir -p >> configure:2493: result: /bin/mkdir -p >> configure:2506: checking for gawk >> configure:2522: found /usr/bin/gawk >> configure:2533: result: gawk >> configure:2544: checking whether make sets $(MAKE) >> configure:2566: result: yes >> configure:2640: checking whether to enable maintainer-specific portions of >> Makefiles >> configure:2649: result: no >> configure:2662: checking auto silent in maintainer mode >> configure:2674: result: auto-sleep-9 >> configure:2729: checking build system type >> configure:2747: result: i686-pc-linux-gnu >> configure:2769: checking host system type >> configure:2784: result: i686-pc-linux-gnu >> configure:2883: checking for style of include used by make >> configure:2911: result: GNU >> configure:3045: checking for C++ compiler version >> configure:3053: /opt/intel/cc/10.1.018/bin/icpc --version >&5 >> icpc (ICC) 10.1 20080801 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> >> configure:3057: $? = 0 >> configure:3064: /opt/intel/cc/10.1.018/bin/icpc -v >&5 >> Version 10.1 >> configure:3068: $? = 0 >> configure:3075: /opt/intel/cc/10.1.018/bin/icpc -V >&5 >> Intel(R) C++ Compiler for applications running on IA-32, Version 10.1 >> Build 20080801 Package ID: l_cc_p_10.1.018 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> FOR NON-COMMERCIAL USE ONLY >> >> configure:3079: $? = 0 >> configure:3102: checking for C++ compiler default output file name >> configure:3124: /opt/intel/cc/10.1.018/bin/icpc conftest.cpp >&5 >> configure:3128: $? = 0 >> configure:3166: result: a.out >> configure:3185: checking whether the C++ compiler works >> configure:3195: ./a.out >> configure:3199: $? = 0 >> configure:3218: result: yes >> configure:3225: checking whether we are cross compiling >> configure:3227: result: no >> configure:3230: checking for suffix of executables >> configure:3237: /opt/intel/cc/10.1.018/bin/icpc -o conftest conftest.cpp >> >&5 >> configure:3241: $? = 0 >> configure:3267: result: >> configure:3273: checking for suffix of object files >> configure:3299: /opt/intel/cc/10.1.018/bin/icpc -c conftest.cpp >&5 >> configure:3303: $? = 0 >> configure:3328: result: o >> configure:3332: checking whether we are using the GNU C++ compiler >> configure:3361: /opt/intel/cc/10.1.018/bin/icpc -c conftest.cpp >&5 >> configure:3368: $? = 0 >> configure:3385: result: yes >> configure:3394: checking whether /opt/intel/cc/10.1.018/bin/icpc accepts -g >> configure:3424: /opt/intel/cc/10.1.018/bin/icpc -c -g conftest.cpp >&5 >> configure:3431: $? = 0 >> configure:3532: result: yes >> configure:3557: checking dependency style of /opt/intel/cc/10.1.018/bin/icpc >> configure:3667: result: gcc3 >> configure:3713: checking for boostlib >= 1.33.1 >> configure:3773: /opt/intel/cc/10.1.018/bin/icpc -c -g -O2 -I/usr/include >> conftest.cpp >&5 >> configure:3780: $? = 0 >> configure:3786: result: yes >> configure:4001: checking for gcc >> configure:4028: result: /opt/intel/cc/10.1.018/bin/icc >> configure:4260: checking for C compiler version >> configure:4268: /opt/intel/cc/10.1.018/bin/icc --version >&5 >> icc (ICC) 10.1 20080801 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> >> configure:4272: $? = 0 >> configure:4279: /opt/intel/cc/10.1.018/bin/icc -v >&5 >> Version 10.1 >> configure:4283: $? = 0 >> configure:4290: /opt/intel/cc/10.1.018/bin/icc -V >&5 >> Intel(R) C Compiler for applications running on IA-32, Version 10.1 Build >> 20080801 Package ID: l_cc_p_10.1.018 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> FOR NON-COMMERCIAL USE ONLY >> >> configure:4294: $? = 0 >> configure:4297: checking whether we are using the GNU C compiler >> configure:4326: /opt/intel/cc/10.1.018/bin/icc -c conftest.c >&5 >> configure:4333: $? = 0 >> configure:4350: result: yes >> configure:4359: checking whether /opt/intel/cc/10.1.018/bin/icc accepts -g >> configure:4389: /opt/intel/cc/10.1.018/bin/icc -c -g conftest.c >&5 >> configure:4396: $? = 0 >> configure:4497: result: yes >> configure:4514: checking for /opt/intel/cc/10.1.018/bin/icc option to accept >> ISO C89 >> configure:4588: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5 >> configure:4595: $? = 0 >> configure:4618: result: none needed >> configure:4638: checking dependency style of /opt/intel/cc/10.1.018/bin/icc >> configure:4748: result: gcc3 >> configure:4875: checking for C++ compiler version >> configure:4883: /opt/intel/cc/10.1.018/bin/icpc --version >&5 >> icpc (ICC) 10.1 20080801 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> >> configure:4887: $? = 0 >> configure:4894: /opt/intel/cc/10.1.018/bin/icpc -v >&5 >> Version 10.1 >> configure:4898: $? = 0 >> configure:4905: /opt/intel/cc/10.1.018/bin/icpc -V >&5 >> Intel(R) C++ Compiler for applications running on IA-32, Version 10.1 >> Build 20080801 Package ID: l_cc_p_10.1.018 >> Copyright (C) 1985-2008 Intel Corporation. All rights reserved. >> FOR NON-COMMERCIAL USE ONLY >> >> configure:4909: $? = 0 >> configure:4912: checking whether we are using the GNU C++ compiler >> configure:4965: result: yes >> configure:4974: checking whether /opt/intel/cc/10.1.018/bin/icpc accepts -g >> configure:5112: result: yes >> configure:5137: checking dependency style of /opt/intel/cc/10.1.018/bin/icpc >> configure:5247: result: gcc3 >> configure:5267: checking how to run the C++ preprocessor >> configure:5303: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp >> configure:5310: $? = 0 >> configure:5341: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp >> conftest.cpp(11): error #5: could not open source file "ac_nonexistent.h" >> #include <ac_nonexistent.h> >> ^ >> >> configure:5348: $? = 2 >> configure: failed program was: >> | /* confdefs.h. */ >> | #define PACKAGE_NAME "Open Babel" >> | #define PACKAGE_TARNAME "openbabel" >> | #define PACKAGE_VERSION "2.2.3" >> | #define PACKAGE_STRING "Open Babel 2.2.3" >> | #define PACKAGE_BUGREPORT "[email protected]" >> | #define BABEL_VERSION "2.2.3" >> | #define BABEL_DATADIR "/usr/local/share/openbabel" >> | #define HAVE_BOOST /**/ >> | /* end confdefs.h. */ >> | #include <ac_nonexistent.h> >> configure:5381: result: /opt/intel/cc/10.1.018/bin/icpc -E >> configure:5410: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp >> configure:5417: $? = 0 >> configure:5448: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp >> conftest.cpp(11): error #5: could not open source file "ac_nonexistent.h" >> #include <ac_nonexistent.h> >> ^ >> >> configure:5455: $? = 2 >> configure: failed program was: >> | /* confdefs.h. */ >> | #define PACKAGE_NAME "Open Babel" >> | #define PACKAGE_TARNAME "openbabel" >> | #define PACKAGE_VERSION "2.2.3" >> | #define PACKAGE_STRING "Open Babel 2.2.3" >> | #define PACKAGE_BUGREPORT "[email protected]" >> | #define BABEL_VERSION "2.2.3" >> | #define BABEL_DATADIR "/usr/local/share/openbabel" >> | #define HAVE_BOOST /**/ >> | /* end confdefs.h. */ >> | #include <ac_nonexistent.h> >> configure:5508: checking for a BSD-compatible install >> configure:5576: result: /usr/bin/install -c >> configure:5589: checking for doxygen >> configure:5607: found /usr/bin/doxygen >> configure:5619: result: /usr/bin/doxygen >> configure:5629: checking for swig >> configure:5662: result: no >> configure:5669: checking for perl >> configure:5687: found /usr/bin/perl >> configure:5699: result: /usr/bin/perl >> configure:5709: checking for prove >> configure:5727: found /usr/bin/prove >> configure:5739: result: /usr/bin/prove >> configure:5749: checking for python >> configure:5767: found /usr/bin/python >> configure:5779: result: /usr/bin/python >> configure:5789: checking for ruby >> configure:5807: found /usr/bin/ruby >> configure:5819: result: /usr/bin/ruby >> configure:5831: checking for gmcs >> configure:5864: result: no >> configure:5875: checking for javac >> configure:5908: result: no >> configure:5915: checking for jar >> configure:5948: result: no >> configure:5958: checking for wx-config >> configure:5976: found /usr/local/bin/wx-config >> configure:5988: result: /usr/local/bin/wx-config >> configure:6443: checking for a sed that does not truncate output >> configure:6509: result: /bin/sed >> configure:6527: checking for grep that handles long lines and -e >> configure:6587: result: /bin/grep >> configure:6592: checking for egrep >> configure:6656: result: /bin/grep -E >> configure:6661: checking for fgrep >> configure:6725: result: /bin/grep -F >> configure:6760: checking for ld used by /opt/intel/cc/10.1.018/bin/icc >> configure:6827: result: /usr/bin/ld >> configure:6836: checking if the linker (/usr/bin/ld) is GNU ld >> configure:6851: result: yes >> configure:6863: checking for BSD- or MS-compatible name lister (nm) >> configure:6912: result: /usr/bin/nm -B >> configure:7030: checking the name lister (/usr/bin/nm -B) interface >> configure:7037: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5 >> configure:7040: /usr/bin/nm -B "conftest.o" >> configure:7043: output >> 00000000 N .debug_info_seg >> 00000000 B some_variable >> configure:7050: result: BSD nm >> configure:7053: checking whether ln -s works >> configure:7057: result: yes >> configure:7065: checking the maximum length of command line arguments >> configure:7185: result: 98304 >> configure:7202: checking whether the shell understands some XSI constructs >> configure:7212: result: yes >> configure:7216: checking whether the shell understands "+=" >> configure:7222: result: yes >> configure:7257: checking for /usr/bin/ld option to reload object files >> configure:7264: result: -r >> configure:7333: checking for objdump >> configure:7360: result: objdump >> configure:7389: checking how to recognize dependent libraries >> configure:7585: result: pass_all >> configure:7645: checking for ar >> configure:7661: found /usr/bin/ar >> configure:7672: result: ar >> configure:7750: checking for strip >> configure:7766: found /usr/bin/strip >> configure:7777: result: strip >> configure:7849: checking for ranlib >> configure:7865: found /usr/bin/ranlib >> configure:7876: result: ranlib >> configure:7966: checking command to parse /usr/bin/nm -B output from >> /opt/intel/cc/10.1.018/bin/icc object >> configure:8084: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5 >> configure:8087: $? = 0 >> configure:8091: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ >> ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ >> ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm >> configure:8094: $? = 0 >> configure:8148: /opt/intel/cc/10.1.018/bin/icc -o conftest -g -O2 >> conftest.c conftstm.o >&5 >> configure:8151: $? = 0 >> configure:8189: result: ok >> configure:9056: checking how to run the C preprocessor >> configure:9174: result: /opt/intel/cc/10.1.018/bin/icpc >> configure:9203: /opt/intel/cc/10.1.018/bin/icpc conftest.c >> conftest.c(16): error: identifier "Syntax" is undefined >> Syntax error >> ^ >> >> conftest.c(16): error: expected a ";" >> >> compilation aborted for conftest.c (code 2) >> configure:9210: $? = 2 >> configure: failed program was: >> | /* confdefs.h. */ >> | #define PACKAGE_NAME "Open Babel" >> | #define PACKAGE_TARNAME "openbabel" >> | #define PACKAGE_VERSION "2.2.3" >> | #define PACKAGE_STRING "Open Babel 2.2.3" >> | #define PACKAGE_BUGREPORT "[email protected]" >> | #define BABEL_VERSION "2.2.3" >> | #define BABEL_DATADIR "/usr/local/share/openbabel" >> | #define HAVE_BOOST /**/ >> | /* end confdefs.h. */ >> | #ifdef __STDC__ >> | # include <limits.h> >> | #else >> | # include <assert.h> >> | #endif >> | Syntax error >> configure:9203: /opt/intel/cc/10.1.018/bin/icpc conftest.c >> conftest.c(16): error: identifier "Syntax" is undefined >> Syntax error >> ^ >> >> conftest.c(16): error: expected a ";" >> >> compilation aborted for conftest.c (code 2) >> configure:9210: $? = 2 >> configure: failed program was: >> | /* confdefs.h. */ >> | #define PACKAGE_NAME "Open Babel" >> | #define PACKAGE_TARNAME "openbabel" >> | #define PACKAGE_VERSION "2.2.3" >> | #define PACKAGE_STRING "Open Babel 2.2.3" >> | #define PACKAGE_BUGREPORT "[email protected]" >> | #define BABEL_VERSION "2.2.3" >> | #define BABEL_DATADIR "/usr/local/share/openbabel" >> | #define HAVE_BOOST /**/ >> | /* end confdefs.h. */ >> | #ifdef __STDC__ >> | # include <limits.h> >> | #else >> | # include <assert.h> >> | #endif >> | Syntax error >> configure:9272: error: in `/home/ofer4/Downloads/openbabel-2.2.3': >> configure:9275: error: C preprocessor "/opt/intel/cc/10.1.018/bin/icpc" >> fails sanity check >> See `config.log' for more details. >> >> ## ---------------- ## >> ## Cache variables. ## >> ## ---------------- ## >> >> ac_cv_build=i686-pc-linux-gnu >> ac_cv_c_compiler_gnu=yes >> ac_cv_cxx_compiler_gnu=yes >> ac_cv_env_CCC_set= >> ac_cv_env_CCC_value= >> ac_cv_env_CC_set=set >> ac_cv_env_CC_value=/opt/intel/cc/10.1.018/bin/icc >> ac_cv_env_CFLAGS_set= >> ac_cv_env_CFLAGS_value= >> ac_cv_env_CPPFLAGS_set= >> ac_cv_env_CPPFLAGS_value= >> ac_cv_env_CPP_set=set >> ac_cv_env_CPP_value=/opt/intel/cc/10.1.018/bin/icpc >> ac_cv_env_CXXCPP_set= >> ac_cv_env_CXXCPP_value= >> ac_cv_env_CXXFLAGS_set= >> ac_cv_env_CXXFLAGS_value= >> ac_cv_env_CXX_set=set >> ac_cv_env_CXX_value=/opt/intel/cc/10.1.018/bin/icpc >> ac_cv_env_LDFLAGS_set= >> ac_cv_env_LDFLAGS_value= >> ac_cv_env_LIBS_set= >> ac_cv_env_LIBS_value= >> ac_cv_env_WXCONFIG_set= >> ac_cv_env_WXCONFIG_value= >> ac_cv_env_build_alias_set= >> ac_cv_env_build_alias_value= >> ac_cv_env_host_alias_set= >> ac_cv_env_host_alias_value= >> ac_cv_env_target_alias_set= >> ac_cv_env_target_alias_value= >> ac_cv_host=i686-pc-linux-gnu >> ac_cv_objext=o >> ac_cv_path_DOXYGEN=/usr/bin/doxygen >> ac_cv_path_EGREP='/bin/grep -E' >> ac_cv_path_FGREP='/bin/grep -F' >> ac_cv_path_GREP=/bin/grep >> ac_cv_path_PERL=/usr/bin/perl >> ac_cv_path_PROVE=/usr/bin/prove >> ac_cv_path_PYTHON=/usr/bin/python >> ac_cv_path_RUBY=/usr/bin/ruby >> ac_cv_path_SED=/bin/sed >> ac_cv_path_WXCONFIG=/usr/local/bin/wx-config >> ac_cv_path_install='/usr/bin/install -c' >> ac_cv_path_mkdir=/bin/mkdir >> ac_cv_prog_AWK=gawk >> ac_cv_prog_CPP=/opt/intel/cc/10.1.018/bin/icpc >> ac_cv_prog_CXXCPP='/opt/intel/cc/10.1.018/bin/icpc -E' >> ac_cv_prog_ac_ct_AR=ar >> ac_cv_prog_ac_ct_CC=/opt/intel/cc/10.1.018/bin/icc >> ac_cv_prog_ac_ct_OBJDUMP=objdump >> ac_cv_prog_ac_ct_RANLIB=ranlib >> ac_cv_prog_ac_ct_STRIP=strip >> ac_cv_prog_cc_c89= >> ac_cv_prog_cc_g=yes >> ac_cv_prog_cxx_g=yes >> ac_cv_prog_make_make_set=yes >> am_cv_CC_dependencies_compiler_type=gcc3 >> am_cv_CXX_dependencies_compiler_type=gcc3 >> lt_cv_deplibs_check_method=pass_all >> lt_cv_file_magic_cmd='$MAGIC_CMD' >> lt_cv_file_magic_test_file= >> lt_cv_ld_reload_flag=-r >> lt_cv_nm_interface='BSD nm' >> lt_cv_path_LD=/usr/bin/ld >> lt_cv_path_NM='/usr/bin/nm -B' >> lt_cv_prog_gnu_ld=yes >> lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ >> ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ >> ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\''' >> lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ >> {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ >> {"\2", (void *) \&\2},/p'\''' >> lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: >> \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) >> \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ >> ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' >> lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int >> \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' >> lt_cv_sys_max_cmd_len=98304 >> >> ## ----------------- ## >> ## Output variables. ## >> ## ----------------- ## >> >> ACLOCAL='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run >> aclocal-1.11' >> AMDEPBACKSLASH='\' >> AMDEP_FALSE='#' >> AMDEP_TRUE='' >> AMTAR='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run tar' >> AR='ar' >> AS='as' >> AUTOCONF='sleep 9 ; true || autoconf || skipped' >> AUTOHEADER='sleep 9 ; true || autoheader || skipped' >> AUTOMAKE='sleep 9 ; true || automake || skipped' >> AWK='gawk' >> BIN2HEX_FALSE='#' >> BIN2HEX_TRUE='' >> BOOST_CPPFLAGS='-I/usr/include' >> BOOST_LDFLAGS='-L/usr/lib' >> BUILD_CSHARP_FALSE='#' >> BUILD_CSHARP_TRUE='' >> BUILD_DOCS_FALSE='#' >> BUILD_DOCS_TRUE='' >> BUILD_INCHI_FALSE='' >> BUILD_INCHI_TRUE='' >> BUILD_JAVA_FALSE='' >> BUILD_JAVA_TRUE='#' >> BUILD_PCH_FALSE='' >> BUILD_PCH_TRUE='' >> BUILD_RUBY_FALSE='#' >> BUILD_RUBY_TRUE='' >> BUILD_SCRIPTS_FALSE='#' >> BUILD_SCRIPTS_TRUE='' >> BUILD_SHARED_FALSE='' >> BUILD_SHARED_TRUE='' >> BUILD_SHARED_UNIX_FALSE='' >> BUILD_SHARED_UNIX_TRUE='' >> BUILD_SHARED_WIN_FALSE='' >> BUILD_SHARED_WIN_TRUE='' >> BUILD_SWIG_FALSE='' >> BUILD_SWIG_TRUE='#' >> BUILD_WXGUI_FALSE='' >> BUILD_WXGUI_TRUE='#' >> BUILD_XML_FALSE='' >> BUILD_XML_TRUE='' >> BUILD_ZLIB_FALSE='' >> BUILD_ZLIB_TRUE='' >> CC='/opt/intel/cc/10.1.018/bin/icc' >> CCDEPMODE='depmode=gcc3' >> CFLAGS='-g -O2' >> CPP='/opt/intel/cc/10.1.018/bin/icpc' >> CPPFLAGS='' >> CSHARP='mcs' >> CXX='/opt/intel/cc/10.1.018/bin/icpc' >> CXXCPP='/opt/intel/cc/10.1.018/bin/icpc -E' >> CXXDEPMODE='depmode=gcc3' >> CXXFLAGS='-g -O2' >> CYGPATH_W='echo' >> DEFS='' >> DEPDIR='.deps' >> DLLTOOL='dlltool' >> DOXYGEN='/usr/bin/doxygen' >> DSYMUTIL='' >> DUMPBIN='' >> ECHO_C='' >> ECHO_N='-n' >> ECHO_T='' >> EGREP='/bin/grep -E' >> EXEEXT='' >> FGREP='/bin/grep -F' >> GREP='/bin/grep' >> HAVE_REGEX_FALSE='' >> HAVE_REGEX_TRUE='' >> HAVE_SHARED_POINTER_FALSE='' >> HAVE_SHARED_POINTER_TRUE='' >> INSTALL_DATA='${INSTALL} -m 644' >> INSTALL_PROGRAM='${INSTALL}' >> INSTALL_SCRIPT='${INSTALL}' >> INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' >> JAR='' >> JAVAC='' >> LD='/usr/bin/ld' >> LDFLAGS='' >> LIBDL='' >> LIBOBJS='' >> LIBS='' >> LIBTOOL='' >> LIPO='' >> LN_S='ln -s' >> LTLIBOBJS='' >> MAINT='#' >> MAINTAINER_MODE_FALSE='' >> MAINTAINER_MODE_TRUE='#' >> MAKEINFO='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run >> makeinfo' >> MKDIR_P='/bin/mkdir -p' >> NM='/usr/bin/nm -B' >> NMEDIT='' >> OBJDUMP='objdump' >> OBJEXT='o' >> OTOOL64='' >> OTOOL='' >> PACKAGE='openbabel' >> PACKAGE_BUGREPORT='[email protected]' >> PACKAGE_NAME='Open Babel' >> PACKAGE_STRING='Open Babel 2.2.3' >> PACKAGE_TARNAME='openbabel' >> PACKAGE_VERSION='2.2.3' >> PATH_SEPARATOR=':' >> PERL='/usr/bin/perl' >> PERL_TESTS_FALSE='#' >> PERL_TESTS_TRUE='' >> PROVE='/usr/bin/prove' >> PYTHON='/usr/bin/python' >> RANLIB='ranlib' >> RUBY='/usr/bin/ruby' >> SED='/bin/sed' >> SET_MAKE='' >> SHELL='/bin/bash' >> STRIP='strip' >> SWIG='' >> USE_BOOST_FLAGS_FALSE='' >> USE_BOOST_FLAGS_TRUE='' >> VERSION='2.2.3' >> WXCONFIG='/usr/local/bin/wx-config' >> WX_CPPFLAGS='' >> WX_CXXFLAGS='' >> WX_LIBS='' >> XML2_CONFIG='' >> XML_CPPFLAGS='' >> XML_LIBS='' >> ac_ct_CC='/opt/intel/cc/10.1.018/bin/icc' >> ac_ct_CXX='' >> ac_ct_DUMPBIN='' >> am__EXEEXT_FALSE='' >> am__EXEEXT_TRUE='' >> am__fastdepCC_FALSE='#' >> am__fastdepCC_TRUE='' >> am__fastdepCXX_FALSE='#' >> am__fastdepCXX_TRUE='' >> am__include='include' >> am__isrc='' >> am__leading_dot='.' >> am__quote='' >> am__tar='${AMTAR} chof - "$$tardir"' >> am__untar='${AMTAR} xf -' >> bindir='${exec_prefix}/bin' >> build='i686-pc-linux-gnu' >> build_alias='' >> build_cpu='i686' >> build_os='linux-gnu' >> build_vendor='pc' >> datadir='${datarootdir}' >> datarootdir='${prefix}/share' >> docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' >> dvidir='${docdir}' >> exec_prefix='${prefix}' >> host='i686-pc-linux-gnu' >> host_alias='' >> host_cpu='i686' >> host_os='linux-gnu' >> host_vendor='pc' >> htmldir='${docdir}' >> includedir='${prefix}/include' >> infodir='${datarootdir}/info' >> install_sh='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/install-sh' >> libdir='${exec_prefix}/lib' >> libexecdir='${exec_prefix}/libexec' >> localedir='${datarootdir}/locale' >> localstatedir='${prefix}/var' >> lt_ECHO='echo' >> mandir='${datarootdir}/man' >> mkdir_p='/bin/mkdir -p' >> oldincludedir='/usr/include' >> pdfdir='${docdir}' >> pkglibdir='' >> prefix='/usr/local' >> program_transform_name='s,x,x,' >> psdir='${docdir}' >> sbindir='${exec_prefix}/sbin' >> sharedstatedir='${prefix}/com' >> sysconfdir='${prefix}/etc' >> target_alias='' >> >> ## ----------- ## >> ## confdefs.h. ## >> ## ----------- ## >> >> #define PACKAGE_NAME "Open Babel" >> #define PACKAGE_TARNAME "openbabel" >> #define PACKAGE_VERSION "2.2.3" >> #define PACKAGE_STRING "Open Babel 2.2.3" >> #define PACKAGE_BUGREPORT "[email protected]" >> #define BABEL_VERSION "2.2.3" >> #define BABEL_DATADIR "/usr/local/share/openbabel" >> #define HAVE_BOOST /**/ >> >> configure: exit 1 >> >> ------------------------------------------------------------------------------ >> >> _______________________________________________ >> OpenBabel-discuss mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss >> >> > ------------------------------------------------------------------------------ _______________________________________________ OpenBabel-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
