Hi,
I have tried to run a script, the first part of which reads an approx 1GB sd 
file using pybel.  However the script hangs and generates a pop-up window 
saying 
C++ error in the title bar but the window itself is transparent with no message 
in it.  Running the script again, the memory usage got to ~2.4GB (out of 4) 
when 
the script hung so machine memory does not appear to be the issue.
I tried a smaller 50K sd file and the script ran fine.  I then put the big file 
back in and asked the script to print something as soon as it had finished 
reading the file but it did not before the error window appeared.  Is there a 
limit on the size of file I can read in or is this more likely to be a specific 
installation issue (it is a Windows Vista machine)?
If I have to chop the SD into smaller chunks, is there an elegant way of doing 
this without messy ends/starts to the resulting chunks?
thanks,
Andy



      
------------------------------------------------------------------------------
The ultimate all-in-one performance toolkit: Intel(R) Parallel Studio XE:
Pinpoint memory and threading errors before they happen.
Find and fix more than 250 security defects in the development cycle.
Locate bottlenecks in serial and parallel code that limit performance.
http://p.sf.net/sfu/intel-dev2devfeb
_______________________________________________
OpenBabel-discuss mailing list
OpenBabel-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/openbabel-discuss

Reply via email to