Hello, I am encountering a simple problem in which I am trying to convert an SDF file to PDB format. The 3d SDF file in question is taken from "glycolaldehyde" on the NIST Chemistry Webook.
The issue is that there seems to be a spurious entry in CONECT upon conversion to PDB: CONECT 2 1 3 6 7 CONECT 2 Is this expected behavior? I was under the impression that each atom in a PDB file should have only a single line that lists all bonds that atom has with other atoms. Thanks, John
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