Hi,

Ok, I’ll have a look and see what I can contribute.

Cheers,

Chris

> The (de)protonation rules are stored as a list of transformation using SMARTS
> format in a file called /phmodel.txt/inside the /data/ directory. Such file
> is editable but as Geoff suggested is not trivial to carefully enumerate all
> the potential transformations for many functional groups and substructures
> at different pH. As far as I know currently there is no open source software
> that do that properly, so any advance in this sense will be appreciated by
> the community.
> Gio

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