Dear all, I see that when I convert the attached file from sdf to pdb or pdbqt, Obabel guesses a few atoms as ALA (could be an amino acid Alanine) and changes its atom name to ALA. Does anyone know any possible cause and how to avoid this? I am posting this again as I didn't get an answer for this before.
Attached are the files. Thanks, Jubilant
443884.sdf
Description: Binary data
443884.pdb
Description: Protein Databank data
443884.pdbqt
Description: Binary data
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