Hello,

This is a known bug with OpenBabel (see bug report at
http://sourceforge.net/tracker/?func=detail&aid=2841031&group_id=40728&atid=428740).
I'm afraid there's no way around it at the moment.

- Noel

On 18 February 2010 18:44, benomrane brahim <[email protected]> wrote:
> Hi,
> i need to integrate OpenBabel into my application which created with JAVA so
> for that i Used your API OpenBabel.jar
> the result is perfectly when i use small file BUT when i use big file  for
> example if i convert 114D.pdb (size 44Ko) into input mopac my program block
> and Win Dialog error Start (lock in jointed file)
> my class is
> package viewer;
> import org.openbabel.*;
> public class OpenBabelConverter {
>
>   public OpenBabelConverter()
>  {
>    System.loadLibrary("openbabel_java");
>  }
>   public void startconvert(String typein,
>                            String filein,
>                            String typeout,
>                            String fileout
>                            ) {
>       OBConversion conv = new OBConversion();
>
>       OBMol mol = new OBMol();
>
>        conv.SetInFormat(typein);
>        conv.ReadFile(mol,filein);
>
>        conv.SetOutFormat(typeout);
>        conv.WriteFile(mol,fileout);
>        conv.CloseOutFile();
>   }
> }
> Please i need your Help Thank's
>
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>

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proactively, and fine-tune applications for parallel performance.
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