Hi,

On Tue, Jan 12, 2021 at 5:41 PM Jack Mitchell <[email protected]> wrote:
>
> On 12/01/2021 15:35, [email protected] wrote:
> > I am trying to create a `yocto` `recipe` for `scikit-learn` package. It
> > depends on `scipy` pacakge. I was able to successfully build the `scipy`
> > package using : https://github.com/gpanders/meta-scipy
> > <https://github.com/gpanders/meta-scipy>.
> >
> > When I run `bitbake python3-scikit-learn`, i am getting the below error:
> > `ModuleNotFoundError: No module named 'scipy'`
> >
> > I am executing the commands in the below order.
> >
> > Once I have cloned/copied the `scipy` recipes and the patches listed in
> > the `meta-scipy`, i am running `bitbake python3-scipy` and the build was
> > successful.
> >
> > Then, I created a `recipe` file with the name
> > `python3-scikit-learn_0.23.2.bb
> > <http://python3-scikit-learn_0.23.2.bb/>` and the contents are as below.
> >
> > ```
> > PYPI_PACKAGE = "scikit-learn"
> >
> > LICENSE = "BSD"
> > LIC_FILES_CHKSUM  =
> > "file://PKG-INFO;beginline=8;endline=8;md5=40ee42dc5a49f1617c5c78f16c50e065"
> >
> > SRC_URI[sha256sum] =
> > "20766f515e6cd6f954554387dfae705d93c7b544ec0e6c6a5d8e006f6f7ef480"
> >
> > inherit pypi setuptools3
> >
> > #DEPENDS = "${PYTHON_PN}-numpy-native ${PYTHON_PN}-numpy
> > ${PYTHON_PN}-scipy ${PYTHON_PN}-joblib ${PYTHON_PN}"
> > DEPENDS = "${PYTHON_PN}-numpy-native ${PYTHON_PN}-numpy
> > ${PYTHON_PN}-scipy ${PYTHON_PN}"
> >
> > RDEPENDS_${PN} += "${PYTHON_PN}-numpy ${PYTHON_PN}-scipy"
> > ```
> >
> > When I run the `bitbake python3-scikit-learn`, i am getting this
> > `ModuleNotFoundError: No module named 'scipy'`
> >
> > Checked the path where the `devshell python3` is looking
> > (`poky/build/tmp-glibc/work/aarch64-oe-linux/python3-scikit-learn/0.23.2-r0/recipe-sysroot-native/usr/lib/python3.8/site-packages`),
> > and i can only see the `numpy` package there, but `scipy` package is not
> > there.
> >
> > `ls` command output :
> > ```easy_install.py
> >  numpy
> >  numpy-1.17.4-py3.8.egg-info
> >  pkg_resources
> >  __pycache__
> >  README.txt
> >  setuptools
> >  setuptools-45.2.0-py3.8.egg-info
> > ```
> >
> > Can someone point me on how to include the `python3-scipy` package, so
> > that it will be included/copied to the `devshell`. Or do I need to
> > update/fix something else.
> >
> > Appreciate any guidance on this.
> >
>
> I'm also working on a scikit-learn recipe, you need to create a recipe
> to provide python3-scipy-native as it uses this during the build
> process. However, even with this recipe in place and scikit-learn
> building, the resulting packages doesn't work due to inconsistencies in
> the build, with the most obvious failure looking like a 64bit -> 32bit
> compile error from using the native include headers in cython generated
> files. I'm still looking into this but if anybody else has managed to
> get this compiled properly I would also be interested in hearing about it.
Same here, I didn't manage to make a proper recipe in yocto. Some
advice I get on github:
https://github.com/scikit-learn/scikit-learn/issues/19037
>
> Regards,
> Jack.
>
> --
> Jack Mitchell, Consultant
> https://www.tuxable.co.uk
>
> 
>
BR,

marek

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