Hello community,
here is the log from the commit of package python-pymol for openSUSE:Factory
checked in at 2020-09-09 18:01:45
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-pymol (Old)
and /work/SRC/openSUSE:Factory/.python-pymol.new.3399 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-pymol"
Wed Sep 9 18:01:45 2020 rev:7 rq:833060 version:2.4.0
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-pymol/python-pymol.changes
2020-02-11 22:24:37.143541726 +0100
+++ /work/SRC/openSUSE:Factory/.python-pymol.new.3399/python-pymol.changes
2020-09-09 18:08:11.599539570 +0200
@@ -1,0 +2,26 @@
+Tue Sep 1 16:19:42 UTC 2020 - Matej Cepl <mc...@suse.com>
+
+- Update to 2.4.0:
+ * load_traj
+ - support netcdf format
+ - support `selection` argument with all file formats
+ * CCP4/MRC Map Support
+ - Distinguish .ccp4 and .mrc extensions (regarding origin)
+ - .map extension: auto-detect the format
+ * New distance mode 8
+ * MMTF export: Consider `pdb_retain_ids` setting
+ * GLTF export (based on collada2gltf)
+ * New `internal_gui_name_color_mode` setting
+ * MPEG4 Movie export: Apply `movie_fps` setting to exported
+ file
+ * Python API
+ - Improved error handling with exceptions
+ - New: cmd.rebond()
+ - New: cmd.get_capabilities()
+ - Fix: cmd.get_bonds() state off by one
+ - cmd.fit() et al.: raise on error
+ * Launch Options
+ - Restore `-V` launch argument for external GUI height
+ - macOS: `open` event opens new window
+
+-------------------------------------------------------------------
Old:
----
pymol-open-source-2.3.0.tar.gz
New:
----
pymol-open-source-2.4.0.tar.gz
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-pymol.spec ++++++
--- /var/tmp/diff_new_pack.BmghaC/_old 2020-09-09 18:08:14.571542278 +0200
+++ /var/tmp/diff_new_pack.BmghaC/_new 2020-09-09 18:08:14.571542278 +0200
@@ -20,7 +20,7 @@
%define oldpython python
%define modname pymol-open-source
Name: python-pymol
-Version: 2.3.0
+Version: 2.4.0
Release: 0
Summary: A Molecular Viewer
License: Python-2.0
@@ -41,6 +41,7 @@
BuildRequires: gcc-c++
BuildRequires: glew-devel
BuildRequires: glm-devel
+BuildRequires: netcdf-devel
# BuildRequires: libmsgpack-devel
BuildRequires: libpng-devel
BuildRequires: libxml2-devel
++++++ no-build-date.patch ++++++
--- /var/tmp/diff_new_pack.BmghaC/_old 2020-09-09 18:08:14.591542296 +0200
+++ /var/tmp/diff_new_pack.BmghaC/_new 2020-09-09 18:08:14.595542300 +0200
@@ -12,12 +12,12 @@
--- a/create_shadertext.py
+++ b/create_shadertext.py
-@@ -141,7 +141,7 @@ def create_buildinfo(outputdir, pymoldir
+@@ -133,7 +133,7 @@ def create_buildinfo(outputdir, pymoldir
+ print('''
#define _PyMOL_BUILD_DATE %d
#define _PYMOL_BUILD_GIT_SHA "%s"
- #define _PyMOL_BUILD_SVN_REV %d
-- ''' % (time.time(), sha, rev), file=out)
-+ ''' % (0, sha, rev), file=out)
+- ''' % (time.time(), sha), file=out)
++ ''' % (0, sha), file=out)
if __name__ == "__main__":
create_shadertext(*sys.argv[1:6])
++++++ no-o3.patch ++++++
--- /var/tmp/diff_new_pack.BmghaC/_old 2020-09-09 18:08:14.603542307 +0200
+++ /var/tmp/diff_new_pack.BmghaC/_new 2020-09-09 18:08:14.603542307 +0200
@@ -1,14 +1,11 @@
--- a/setup.py
+++ b/setup.py
-@@ -261,11 +261,6 @@ ext_comp_args = [
+@@ -272,8 +272,6 @@ ext_comp_args = [
"-Wno-narrowing",
# legacy stuff
'-Wno-char-subscripts',
- # optimizations
-- "-ffast-math",
-- "-funroll-loops",
-- "-O0" if DEBUG else "-O3",
-- "-fcommon",
+- "-Og" if DEBUG else "-O3",
]
ext_link_args = []
ext_objects = []
++++++ pymol-open-source-2.3.0.tar.gz -> pymol-open-source-2.4.0.tar.gz ++++++
/work/SRC/openSUSE:Factory/python-pymol/pymol-open-source-2.3.0.tar.gz
/work/SRC/openSUSE:Factory/.python-pymol.new.3399/pymol-open-source-2.4.0.tar.gz
differ: char 12, line 1
