Hi,
We got this error from our application. Did anybody see this before? What
does this exception mean? Looks like we can't write anything to the db now.
We are using 1.7.9 plocal connection pool in our application. The OS is
CentOS.
com.orientechnologies.orient.core.exception.OStorageException: Error on
creating record in cluster:
com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster@12c7298c
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OLocalPaginatedStorage.createRecord(OLocalPaginatedStorage.java:690)
at
com.orientechnologies.orient.core.db.raw.ODatabaseRaw.save(ODatabaseRaw.java:271)
at
com.orientechnologies.orient.core.db.record.ODatabaseRecordAbstract.executeSaveRecord(ODatabaseRecordAbstract.java:1136)
at
com.orientechnologies.orient.core.tx.OTransactionNoTx.saveRecord(OTransactionNoTx.java:84)
at
com.orientechnologies.orient.core.db.record.ODatabaseRecordTx.save(ODatabaseRecordTx.java:322)
at
com.orientechnologies.orient.core.db.record.ODatabaseRecordTx.save(ODatabaseRecordTx.java:40)
at
com.orientechnologies.orient.core.record.ORecordAbstract.save(ORecordAbstract.java:335)
at
com.orientechnologies.orient.core.record.impl.ODocument.save(ODocument.java:1439)
at
com.orientechnologies.orient.core.record.impl.ODocument.save(ODocument.java:1428)
at
com.orientechnologies.orient.core.record.impl.ODocument.save(ODocument.java:1417)
at
org.ndexbio.common.persistence.orientdb.PersistenceService.createNdexPropertyVertex(PersistenceService.java:114)
at
org.ndexbio.common.persistence.orientdb.NdexPersistenceService.addPropertyToVertex(NdexPersistenceService.java:289)
at
org.ndexbio.common.persistence.orientdb.NdexPersistenceService.setElementProperty(NdexPersistenceService.java:1037)
at
org.ndexbio.xbel.splitter.AnnotationDefinitionGroupSplitter.process(AnnotationDefinitionGroupSplitter.java:89)
at
org.ndexbio.xbel.splitter.XBelSplitter.endElement(XBelSplitter.java:146)
at org.apache.xerces.parsers.AbstractSAXParser.endElement(Unknown
Source)
at
org.apache.xerces.impl.XMLNSDocumentScannerImpl.scanEndElement(Unknown
Source)
at
org.apache.xerces.impl.XMLDocumentFragmentScannerImpl$FragmentContentDispatcher.dispatch(Unknown
Source)
at
org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
Source)
at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
at org.apache.xerces.parsers.XMLParser.parse(Unknown Source)
at org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source)
at org.apache.xerces.jaxp.SAXParserImpl$JAXPSAXParser.parse(Unknown
Source)
at
org.ndexbio.task.parsingengines.XbelParser.processAnnotationDefinitions(XbelParser.java:169)
at
org.ndexbio.task.parsingengines.XbelParser.parseFile(XbelParser.java:95)
at org.ndexbio.task.FileUploadTask.processFile(FileUploadTask.java:104)
at org.ndexbio.task.FileUploadTask.call(FileUploadTask.java:47)
at org.ndexbio.task.FileUploadTask.call(FileUploadTask.java:22)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: com.orientechnologies.orient.core.exception.OStorageException
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.createRecord(OPaginatedCluster.java:456)
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OLocalPaginatedStorage.createRecord(OLocalPaginatedStorage.java:673)
... 34 more
Caused by:
com.orientechnologies.common.directmemory.ODirectMemoryViolationException:
Provided offset [90448] is more than size of allocated area [65552]
at
com.orientechnologies.common.directmemory.ODirectMemoryPointer.rangeCheck(ODirectMemoryPointer.java:163)
at
com.orientechnologies.common.directmemory.ODirectMemoryPointer.getInt(ODirectMemoryPointer.java:78)
at
com.orientechnologies.common.serialization.types.OIntegerSerializer.deserializeFromDirectMemory(OIntegerSerializer.java:87)
at
com.orientechnologies.orient.core.storage.impl.local.paginated.base.ODurablePage.getIntValue(ODurablePage.java:97)
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OClusterPage.appendRecord(OClusterPage.java:99)
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.addEntry(OPaginatedCluster.java:1049)
at
com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.createRecord(OPaginatedCluster.java:445)
... 35 more
Thanks,
Jing
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