DongInn Kim wrote: > Do you get the error when you re-log in on the head node too? > >> switcher/1.0.13(91):ERROR:105: Unable to locate a modulefile for >> 'mpi/mpich-ch_p4-gcc-1.2.7' >> No, when I log into the master I don't see the message. > What is in /root/.switcher.ini on the client nodes? > [EMAIL PROTECTED] ~]# ls -al .switcher.ini ls: cannot access .switcher.ini: No such file or directory
Hum... I think this explains that... (/root/.switcher.ini is present on the master node) > Can we get the output of "rpm -qa | grep module" on the client node? > [EMAIL PROTECTED] ~]# rpm -qa | grep module lam-switcher-modulefile-7.1.4-2.oscar openmpi-switcher-modulefile-1.2.4-1 torque-modulefile-2.1.10-1oscar module-init-tools-3.4-2.fc8 modules-oscar-3.2.5-2 mpich-ch_p4-gcc-oscar-module-1.2.7-9 lam-oscar-modulefile-7.1.4-1 modules-default-manpath-oscar-1.0.1-1 pvm-modules-oscar-3.4.5+6-2 One thing that I forgot to say: at step 2 of install_cluster (configure selected OSCAR package) I cannot configure switcher. I get the messages: on the console when entering step 2: --> About to run /var/lib/oscar/packages/switcher/pre_configure for switcher No pkg_config found on the gui when clicking on switcher: No pkg_config were supplied by any OSCAR packages -- nothing to configure on the console when leaving step 2: --> About to run /var/lib/oscar/packages/switcher/api-post-configure for switcher Checking if the OPKG has to be excluded... OPKG switcher: Analysing default values I also remember that some OSCAR base packages were not installed correctly (eg: oscar-base-scripts) so I have installed them manually. Maybe it is because I made a lot of start_over (and re-logged). The cluster is not in production. I can reinstall OSCAR if you think this is the best way. Thanks, Mathieu > Regards, > > - DongInn > > > Mathieu Dubois wrote: > >> DongInn Kim wrote: >> >>> OK, they seem to be fine. >>> What about the client side? >>> >>> Can you just show me the contents of "ls -al >>> /opt/env-switcher/share/env-switcher/mpi/" on a client node? >>> >>> >> [EMAIL PROTECTED] ~]# ssh bastet1 >> Last login: Tue Jun 10 17:44:01 2008 from bastet0.limsi.fr >> switcher/1.0.13(91):ERROR:105: Unable to locate a modulefile for >> 'mpi/mpich-ch_p4-gcc-1.2.7' >> [EMAIL PROTECTED] ~]# ls -al /opt/env-switcher/share/env-switcher/mpi/ >> total 20 >> drwxr-xr-x 2 root root 4096 2008-06-09 16:59 . >> drwxr-xr-x 3 root root 4096 2008-06-09 16:59 .. >> -rw-r--r-- 1 root root 2532 2008-06-09 16:59 lam-7.1.4 >> -rw-r--r-- 1 root root 592 2008-06-09 16:59 mpich-ch_p4-gcc-1.2.7 >> -rw-r--r-- 1 root root 2295 2008-06-09 16:59 openmpi-1.2.4 >> >> Seems fine too... cexec shows that files are present on each node. >> >> Mathieu >> >>> Regards, >>> >>> - DongInn >>> >>> >>> Mathieu Dubois wrote: >>> >>> >>>> Hi DongInn, >>>> >>>> Here are the results: >>>> >>>> >>>> >>>>> # ls -al /opt/env-switcher/share/env-switcher/mpi/ >>>>> >>>>> >>>>> >>>> [EMAIL PROTECTED] lib]# ls -al /opt/env-switcher/share/env-switcher/mpi/ >>>> total 20 >>>> drwxr-xr-x 2 root root 4096 2008-06-09 16:45 . >>>> drwxr-xr-x 3 root root 4096 2008-06-09 16:45 .. >>>> -rw-r--r-- 1 root root 2532 2008-06-09 16:45 lam-7.1.4 >>>> -rw-r--r-- 1 root root 592 2008-06-09 16:45 mpich-ch_p4-gcc-1.2.7 >>>> -rw-r--r-- 1 root root 2295 2008-06-09 16:45 openmpi-1.2.4 >>>> >>>> >>>>> # module avail >>>>> >>>>> >>>>> >>>> [EMAIL PROTECTED] lib]# module avail >>>> >>>> ----------------------------------------------------------- >>>> /opt/env-switcher/share/env-switcher >>>> -----------------------------------------------------------mpi/lam-7.1.4 >>>> >>>> mpi/mpich-ch_p4-gcc-1.2.7 mpi/openmpi-1.2.4 >>>> >>>> -------------------------------------------------------------- >>>> /opt/modules/oscar-modulefiles >>>> --------------------------------------------------------------default-manpath/1.0.1(default) >>>> >>>> pvm/3.4.5+6(default) switcher/1.0.13(default) torque/2.1.10 >>>> >>>> ------------------------------------------------------------------- >>>> /opt/modules/version >>>> -------------------------------------------------------------------3.2.5 >>>> >>>> ---------------------------------------------------------- >>>> /opt/modules/Modules/3.2.5/modulefiles >>>> ----------------------------------------------------------dot >>>> module-cvs module-info modules null use.own >>>> >>>> ----------------------------------------------------------------- >>>> /opt/modules/modulefiles >>>> -----------------------------------------------------------------lam/lam-oscar-7.1.4 >>>> >>>> openmpi/openmpi-1.2.4 oscar-modules/1.0.5(default) >>>> >>>> >>>>> # rpm -qa | grep module >>>>> >>>>> >>>>> >>>> [EMAIL PROTECTED] lib]# rpm -qa | grep module >>>> pulseaudio-module-x11-0.9.7-0.17.svn20071017.fc8 >>>> lam-oscar-modulefile-7.1.4-1 >>>> openmpi-switcher-modulefile-1.2.4-1 >>>> modules-oscar-3.2.5-2 >>>> mpich-ch_p4-gcc-oscar-module-1.2.7-9 >>>> pvm-modules-oscar-3.4.5+6-2 >>>> pulseaudio-module-gconf-0.9.7-0.17.svn20071017.fc8 >>>> lam-switcher-modulefile-7.1.4-2.oscar >>>> module-init-tools-3.4-2.fc8 >>>> torque-modulefile-2.1.10-1oscar >>>> modules-default-manpath-oscar-1.0.1-1 >>>> >>>> >>>>> Regards, >>>>> >>>>> - DongInn >>>>> >>>>> >>>>> >>>>> >>>> Thanks, >>>> Mathieu >>>> >>>> >>>>> Mathieu Dubois wrote: >>>>> >>>>> >>>>> >>>>>> Hi everybody, >>>>>> >>>>>> I have successfully installed OSCAR 5.1b2 on a x86_64 Fedora 8 cluster. >>>>>> >>>>>> I have set the system-wide default MPI to mpich (switcher mpi = >>>>>> mpich-ch_p4-gcc-1.2.7 --system on the master node as root) and >>>>>> re-logged on the master node. >>>>>> >>>>>> Each time I try to execute a cpush or cexec, I get the following message >>>>>> (repeated for each node): >>>>>> switcher/1.0.13(91):ERROR:105: Unable to locate a modulefile for >>>>>> 'mpi/mpich-ch_p4-gcc-1.2.7' >>>>>> >>>>>> The files for mpich, lam and openmpi are in >>>>>> /opt/env-switcher/share/env-switcher/mpi on each node. Maybe an >>>>>> environment variable is not set. >>>>>> >>>>>> So I don't know what's wrong and how to fix it. Can somebody help me? >>>>>> >>>>>> Thanks in advance, >>>>>> Any help would be appreciated (first cluster), >>>>>> Mathieu >>>>>> >>>>>> P.S.: In fact I try to compile NEURON >>>>>> (http://www.neuron.yale.edu/neuron/) from source on the cluster. Is >>>>>> there a tutorial on how to do this? >>>>>> >>>>>> ------------------------------------------------------------------------- >>>>>> Check out the new SourceForge.net Marketplace. >>>>>> It's the best place to buy or sell services for >>>>>> just about anything Open Source. >>>>>> http://sourceforge.net/services/buy/index.php >>>>>> _______________________________________________ >>>>>> Oscar-users mailing list >>>>>> Oscar-users@lists.sourceforge.net >>>>>> https://lists.sourceforge.net/lists/listinfo/oscar-users >>>>>> >>>>>> >>>>>> >>>>> ------------------------------------------------------------------------- >>>>> Check out the new SourceForge.net Marketplace. >>>>> It's the best place to buy or sell services for >>>>> just about anything Open Source. >>>>> http://sourceforge.net/services/buy/index.php >>>>> _______________________________________________ >>>>> Oscar-users mailing list >>>>> Oscar-users@lists.sourceforge.net >>>>> https://lists.sourceforge.net/lists/listinfo/oscar-users >>>>> >>>>> >>>>> >>>> ------------------------------------------------------------------------- >>>> Check out the new SourceForge.net Marketplace. >>>> It's the best place to buy or sell services for >>>> just about anything Open Source. >>>> http://sourceforge.net/services/buy/index.php >>>> _______________________________________________ >>>> Oscar-users mailing list >>>> Oscar-users@lists.sourceforge.net >>>> https://lists.sourceforge.net/lists/listinfo/oscar-users >>>> >>>> >>> ------------------------------------------------------------------------- >>> Check out the new SourceForge.net Marketplace. >>> It's the best place to buy or sell services for >>> just about anything Open Source. >>> http://sourceforge.net/services/buy/index.php >>> _______________________________________________ >>> Oscar-users mailing list >>> Oscar-users@lists.sourceforge.net >>> https://lists.sourceforge.net/lists/listinfo/oscar-users >>> >>> >> ------------------------------------------------------------------------- >> Check out the new SourceForge.net Marketplace. >> It's the best place to buy or sell services for >> just about anything Open Source. >> http://sourceforge.net/services/buy/index.php >> _______________________________________________ >> Oscar-users mailing list >> Oscar-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/oscar-users >> > > ------------------------------------------------------------------------- > Check out the new SourceForge.net Marketplace. > It's the best place to buy or sell services for > just about anything Open Source. > http://sourceforge.net/services/buy/index.php > _______________________________________________ > Oscar-users mailing list > Oscar-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/oscar-users > ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. 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