Dear OWLIM devs,
I have a question about this query on uniprot.org
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX up: <http://purl.uniprot.org/core/>
SELECT (count(?this) AS ?countTotal)
WHERE
{ ?this rdfs:seeAlso <http://purl.uniprot.org/pfam/PF01073> .
?this up:organism ?taxon
{ ?taxon rdfs:subClassOf <http://purl.uniprot.org/taxonomy/2759> }
UNION
{ ?taxon rdfs:subClassOf <http://purl.uniprot.org/taxonomy/10239> }
?this up:organism ?taxon .
?taxon up:scientificName ?name
FILTER ( ! contains(?name, "Bacteriophage") )
}
It takes more than 24 hours to compute.
However, if I remove the FILTER ( ! contains(?name, "Bacteriophage") )
it finishes in seconds. What is the reason that this filter operation is
so slow.
Regards,
Jerven Bolleman
--
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Jerven Bolleman jerven.bolle...@isb-sib.ch
SIB Swiss Institute of Bioinformatics Tel: +41 (0)22 379 58 85
CMU, rue Michel Servet 1 Fax: +41 (0)22 379 58 58
1211 Geneve 4,
Switzerland www.isb-sib.ch - www.uniprot.org
Follow us at https://twitter.com/#!/uniprot
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