The referee turned this around insanely fast, so maybe we can get this accepted 
before anyone reads the proposal.  :)

I think most of these issues can be dealt with quickly.  The most substantive 
is his “what is the point of this paper, actually?”  I am thinking we should 
change the title to “Limits on Polarized Leakage for PAPER Epoch of 
Reionization Measurements at 126 and 164 MHz” and basically formulate the paper 
as the referee’s option (2).  Actually getting limits on the polarized spectrum 
directly (option 1) requires undoing the presumed ionosphere attenuation, and 
that is somewhat uncertain.  (3) is the work which would need to be done to get 
(1), and we are doing this now with more realistic ionosphere and model of the 
beam leakage, but I don’t want to hold this paper up.  (4) would also be 
subsumed in what we are doing now as well.

Any comments?

James Aguirre
Associate Professor
Department of Physics and Astronomy
University of Pennsylvania
209 South 33rd Street Philadelphia, PA 19104
(215) 898-9596 (office)
(215) 898-9646 (lab)
[email protected]<mailto:[email protected]>.edu
http://www.sas.upenn.edu/~jaguirre/

Begin forwarded message:

From: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Subject: Referee's Report on ApJ/ApJ98178R1
Date: February 15, 2016 at 9:24:31 PM EST
To: "Aguirre, James" <[email protected]<mailto:[email protected]>>
Cc: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Reply-To: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>, 
"[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>

February 15, 2016

Prof. James E. Aguirre
University of Pennsylvania
Department of Physics and Astronomy
209 South 33rd Street Philadelphia, PA 19104-6396, USA
Philadelphia, PA 19104-6396


Title: New Limits on Polarized Power Spectra at 126 and 164 MHz: Relevance to 
Epoch of Reionization Measurements, ApJ98178R1

Dear Prof. Aguirre,

The revised version of your paper cited above was sent back to the referee, who 
appreciates the changes you have made, but has some questions about the new 
version.

When you resubmit the manuscript, please include a detailed cover letter 
containing the (mandatory) listing of the changes you've made to the text and 
your responses to the report.

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Regards,
Ethan T. Vishniac
AAS Editor-in-Chief
Johns Hopkins University

----------------------------------------------------------------------
Referee Report
Reviewer's Comments:
The authors, for the most part, have addressed many of the comments I had on 
the first draft. In particular, they have done an excellent job with regards to 
addressing my concerns about ionospheric effects. This does now, however, 
invite the question of what the paper is actually aiming to measure (which I 
expand on in my first comment on the revised paper below).

Comments on author reply:

12) My apologies, this was due to left-over text from an earlier draft of 
comments I had prepared - please ignore.

15) My comment here was more to assess whether structure in P_Q or P_U may 
explain structure in P_V as a result of leakage (one would not normally expect 
"structure" in P_V).

16) The axis units now appear fine.

Comments on revised paper:

p.1, title: The paper needs to be clear of what the aim is. Is it to
(1). Place limits on the polarised power spectra at 126 and 164 MHz,
(2). Place limits on the instrumental leakage measured for PAPER,
(3). Place limits on the effect of the ionosphere on polarised power spectra, 
and/or
(4). Place limits on the effect of ionosphere-affected polarised power spectra 
leaking in to the EoR power spectrum.
The title of the paper suggests (1) but there is no mention of what the new 
limit is in the abstract and the conclusion only suggests that they are 
"sufficiently low" but doesn't mention what they are. Based on the addition of 
the new text in sections 3.7, it seems more like (3) or (4) are the main goals 
now. Having said that, undoing the effect of the attenuation caused by (3) 
could be done to place a limit on (1).

p.1, abstract: "of of"->"of"

p.1, abstract: So what is the new limit on polarised power spectra at 126 and 
164 MHz? Depending on which of (1), (2), (3) and/or (4) is your goal you should 
state what the limit is.

p.1, section 1: "Polarized emission ... is a potentially problematic 
foregrounds"->"Polarized emission ... is a potentially problematic foreground"

p.1, section 1: "with modest calibration requirements in future experiments 
like SKA (Sutinjo et al. 2015)" - the referenced paper refers to reducing the 
effect of instrumental leakage through improved beam modelling with the MWA. It 
does not suggest modest calibration requirements for SKA-like instruments. 
Furthermore, SKA is an instrument and not an experiment.

p.1, section 1: "diffuse emission in the southern hemisphere at frequencies 
below 1.4 GHz are due to Mathewson & Milne (1964, 1965)" - Presumably Mathewson 
& Milne had little to do with causing diffuse emission below 1.4 GHz.

p.2, section 1: "Regarding point sources, the number of bright sources below 
200 MHz reported in the literature is small" - While this is certainly true, it 
should also be pointed out that only a small part of the southern sky (and 
northern sky) has been surveyed for such sources.

p.2, section 1: "goal of this paper is to directly quantify the effect of 
polarized leakage on upper limits on the EoR power spectrum" - this goal (which 
is more like (4) mentioned above) is different to that of the title (which is 
more like (1) mentioned above).

p.7, section 4.1: "clearly due to the one observed feature in Figure 6" - be 
more specific about where this feature is, do you mean the feature in P_P at 
|k|<0.2 between 1h and 4.5h?

p.7, section 4.1: "also evident that Band I is less consistent with zero than 
Band II" - Band I is not shown in Figure 6, or anywhere for that matter!

p.7, section 4.1: "leakage terms which which"->"leakage terms which"

p.7, section 4.1: "0.35hMpc"->"0.35 Mpc"; also "0.345 hMpc"->"0.35 hMpc" to be 
consistent.

p.7, section 4.1, last paragraph: Given the low level of leakage assumed and 
the attenuating effect of the ionosphere, the feature between RA 6h and 8h is 
particularly concerning. Given that the source appears to be unphysically 
bright in polarised flux, have there been attempts to jackknife or partition 
the data (e.g. by taking only some days) to test whether the source is still 
present? Could this be due to a satellite in the field of view at that LST? If 
the feature is due to instrument systematics shouldn't it be consistent at all 
LSTs?

p.8, Figure 6: It is difficult to assess whether the power shown in the power 
spectra is saturated with the given intensity scale. For example, could the 
structure in P_V reflect the brightest features in P_P? At what point does P_P 
peak and where does P_V peak?

p.8, section 4.2: How does the predicted leakage compare with what is actually 
seen with PAPER? For example, the images shown in Figure 2 of Kohn et al. 
(2016) show clear evidence of leakage in Stokes Q, U and V (although it is 
difficult to read off the paper itself to give an actual percentage because of 
the intensity scales used - perhaps as part of the collaboration you have 
access to the actual images?).

p.9, section 5: The limits summarised in the conclusion do not address the 
limits suggested by the title of the paper. So what are the new limits on the 
polarised power spectra at 126 and 164 MHz?



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