Thanks to both for your quick response.
From a clean/new build directory I tried your suggestion of
-DVTK_USE_SYSTEM_HDF5=ON I received a different error (fragment
below), which looks like it not finding some HDF5 headers.
I will keep investigating. Obviously something strange about my setup
or use of Macports.
Thanks again.
Michael.
------------ new error
Linking CXX executable ../../../../bin/ChartsCxxTests
[ 34%] Built target ChartsCxxTests
Scanning dependencies of target Xdmf
[ 34%] Building CXX object
Utilities/Xdmf2/libsrc/CMakeFiles/Xdmf.dir/XdmfArray.cxx.o
In file included from
/Users/michael/PhD/ExistingSoftware/ParaView-3.14.1-Source/Utilities/Xdmf2/libsrc/XdmfDataDesc.h:29,
from
/Users/michael/PhD/ExistingSoftware/ParaView-3.14.1-Source/Utilities/Xdmf2/libsrc/XdmfArray.h:28,
from
/Users/michael/PhD/ExistingSoftware/ParaView-3.14.1-Source/Utilities/Xdmf2/libsrc/XdmfArray.cxx:25:
/Users/michael/PhD/ExistingSoftware/ParaView-3.14.1-Source/Utilities/Xdmf2/libsrc/XdmfHDFSupport.h:30:22:
error: H5public.h: No such file or directory
/Users/michael/PhD/ExistingSoftware/ParaView-3.14.1-Source/Utilities/Xdmf2/libsrc/XdmfHDFSupport.h:36:18:
error: hdf5.h: No such file or directory
On 12/10/12 4:03 AM, Pat Marion wrote:
Oops, I meant to say you should set VTK_USE_SYSTEM_HDF5 to ON.
Pat
On Thu, Oct 11, 2012 at 4:02 PM, Pat Marion <pat.mar...@kitware.com
<mailto:pat.mar...@kitware.com>> wrote:
It looks the compiler included system HDF5 headers even though
VTK_USE_SYSTEM_HDF5 is disabled. Then, at link time it doesn't
link the system HDF5 libraries because VTK_USE_SYSTEM_HDF5 if
off. You could try running cmake in the build dir and setting
VTK_USE_SYSTEM_HDF5 to OFF.
I think this might be caused by a tricky a bug in VTK's cmake
scripts. I guess CMake would need to add -IVTK/Utilities/vtkhdf5
before -I/opt/local/include when system hdf5 is off.
Pat
On Thu, Oct 11, 2012 at 3:46 PM, Brickle Macho
<bricklema...@gmail.com <mailto:bricklema...@gmail.com>> wrote:
Hi,
I am trying to build ParaView on my MacBook and I am getting a
list of undefined symbols. Below is the first of about 35+
similar errors. For info all of the required supporting
packages were installed by Macports. I downloaded
ParaView-3.14.1-Source from the website and created a separate
build directory. I received a that I was running Qt 4.8.3
whereas the officially supported version is Qt 4.6.
In case it is related, I had an earlier problem where during
compiling the generated makefile was expecting some Qt file
under files in /opt/local/lib/Resources/... whereas they were
in
/opt/local/Library/Frameworks/QtGui.framework/Versions/4/Resources/...
I resolved this by creating a symbolic link in /opt/local/lib
Not sure where to start to solve the problem. Any help
appreciated.
Regards,
Michael.
--
------- Linking problem below ---------------
[ 75%] Built target vtkPVVTKExtensionsCS
Linking CXX executable
../../../bin/ParaViewCoreVTKExtensionsPrintSelf
Undefined symbols for architecture x86_64:
"_H5check_version", referenced from:
vtkEnzoReaderInternal::GetAttributeNames() in
libvtkPVVTKExtensions.a(vtkEnzoReader.cxx.o)
vtkEnzoReader::LoadAttribute(char const*, int)in
libvtkPVVTKExtensions.a(vtkEnzoReader.cxx.o)
vtkEnzoReader::GetParticles(int, vtkPolyData*, int,
int)in libvtkPVVTKExtensions.a(vtkEnzoReader.cxx.o)
vtkFlashReaderInternal::ReadMetaData() in
libvtkPVVTKExtensions.a(vtkFlashReader.cxx.o)
vtkFlashReaderInternal::GetTime() in
libvtkPVVTKExtensions.a(vtkFlashReader.cxx.o)
vtkFlashReaderInternal::GetCycle() in
libvtkPVVTKExtensions.a(vtkFlashReader.cxx.o)
(maybe you meant: _vtk__H5check_version)
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