Hi, I have followed these instructions. I am trying to install it where I am not a root user. Can someone help to fix this issue.
git clone --recursive https://gitlab.kitware.com/paraview/paraview-superbuild.git cd paraview-superbuild git fetch origin # ensure you have the latest state from the main repo git checkout v5.2.0 # replace `v5.2.0` with tag name of your choice git submodule update cd .. mkdir build cd build ccmake ../paraview-superbuild Kind regards, Mathi On 30 June 2017 at 18:54, Ezhilmathi Krishnasamy <ezhkr...@student.liu.se> wrote: > Hi Thanks! > > When I try to install Paraview, I am getting the following error. > Could some one please tell me how to fix this issue. > I am trying to install the Paraview on a super computer to use it > for remote rendering without using the GUI, like with mesa support. > > kriezh@beskow-login2:/cfs/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD> git > clone --recursive https://gitlab.kitware.com/paraview/paraview-superbuild. > git > Cloning into 'paraview-superbuild'... > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > remote: Counting objects: 6723, done. > remote: Compressing objects: 100% (2459/2459), done. > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > remote: Total 6723 (delta 4451), reused 6342 (delta 4201) > Receiving objects: 100% (6723/6723), 2.05 MiB | 741 KiB/s, done. > Resolving deltas: 100% (4451/4451), done. > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > Checking out files: 100% (196/196), done. > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > Submodule 'superbuild' (https://gitlab.kitware.com/ > paraview/common-superbuild.git) registered for path 'superbuild' > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > Cloning into 'superbuild'... > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > remote: Counting objects: 6752, done. > remote: Compressing objects: 100% (2235/2235), done. > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > remote: Total 6752 (delta 4505), reused 6574 (delta 4395) > Receiving objects: 100% (6752/6752), 1.59 MiB | 592 KiB/s, done. > Resolving deltas: 100% (4505/4505), done. > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > Submodule path 'superbuild': checked out '8f357bb5bf35419c210b3f9e0adbc9 > df08f565f2' > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > > > kriezh@beskow-login2:/cfs/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD/paraview-superbuild> > cmake . > -- The C compiler identification is Intel 14.0.4.20140805 > -- The CXX compiler identification is Intel 14.0.4.20140805 > -- Cray Programming Environment 2.2.1 C > -- Check for working C compiler: /opt/cray/craype/2.2.1/bin/cc > -- Check for working C compiler: /opt/cray/craype/2.2.1/bin/cc -- works > -- Detecting C compiler ABI info > -- Detecting C compiler ABI info - done > -- Detecting C compile features > -- Detecting C compile features - done > -- Cray Programming Environment 2.2.1 CXX > -- Check for working CXX compiler: /opt/cray/craype/2.2.1/bin/CC > -- Check for working CXX compiler: /opt/cray/craype/2.2.1/bin/CC -- works > -- Detecting CXX compiler ABI info > -- Detecting CXX compiler ABI info - done > -- Detecting CXX compile features > -- Detecting CXX compile features - done > CMake Warning at superbuild/cmake/SuperbuildUtils.cmake:242 (message): > Failed to determine if the common superbuild is an old checkout. The > common superbuild may be out of date, but cannot be verified.: warning: > unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': Permission > denied > > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > > warning: unable to access '/afs/pdc.kth.se/home/k/kriezh/.gitconfig': > Permission denied > > error: unknown option `is-ancestor' > > usage: git merge-base [-a|--all] <commit> <commit>... > > or: git merge-base [-a|--all] --octopus <commit>... > or: git merge-base --independent <commit>... > > > > -a, --all output all common ancestors > --octopus find ancestors for a single n-way merge > --independent list revs not reachable from others > Call Stack (most recent call first): > superbuild/CMakeLists.txt:28 (_superbuild_check_up_to_date) > > > -- Check size of void* > -- Check size of void* - done > -- Found Git: /usr/bin/git (found version "1.7.12.4") > -- Determined source version for paraview: 5.4.0 > CMake Error at superbuild/cmake/SuperbuildMacros.cmake:289 (message): > The build tree appears to be inside of the git repository located at > /cfs/klemming/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD/ > paraview-superbuild. > This interferes with the way the superbuild applies patches to projects > and > is not supported. Please relocate the build tree to a directory which is > not under a git repository. > Call Stack (most recent call first): > superbuild/projects/bzip2.cmake:7 (superbuild_apply_patch) > superbuild/cmake/SuperbuildMacros.cmake:477 (include) > superbuild/CMakeLists.txt:113 (_superbuild_discover_projects) > > > -- Configuring incomplete, errors occurred! > See also "/cfs/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD/paraview- > superbuild/CMakeFiles/CMakeOutput.log". > > > Kind regards, > Mathi > > > > > > On 30 June 2017 at 04:13, Cory Quammen <cory.quam...@kitware.com> wrote: > >> On Wed, Jun 28, 2017 at 1:14 PM, Ezhilmathi Krishnasamy >> <ezhkr...@student.liu.se> wrote: >> > Hi, >> > >> > Can anyone please give me some instructions how to Paraview Superbuid >> > to install and use them with out using the GUI (using the python script >> to >> > render the images on the cluster or super computer). >> > >> > I see there are some instructions in here: >> > https://gitlab.kitware.com/paraview/paraview-superbuild/ >> > >> > But I could not find any build instructions. >> >> Take a look again, that page includes the README.md file contents >> which includes build instructions. >> >> To build without the GUI, you should just need to set the options >> ENABLE_qt4 and ENABLE_qt5 to OFF. To build with Python, set >> ENABLE_python to ON. >> >> Best regards, >> Cory >> >> > >> > Kind regards, >> > Mathi >> > >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Please keep messages on-topic and check the ParaView Wiki at: >> > http://paraview.org/Wiki/ParaView >> > >> > Search the list archives at: http://markmail.org/search/?q=ParaView >> > >> > Follow this link to subscribe/unsubscribe: >> > http://public.kitware.com/mailman/listinfo/paraview >> > >> >> >> >> -- >> Cory Quammen >> Staff R&D Engineer >> Kitware, Inc. >> > >
I have followed these instrunctions git clone --recursive https://gitlab.kitware.com/paraview/paraview-superbuild.git cd paraview-superbuild git fetch origin # ensure you have the latest state from the main repo git checkout v5.2.0 # replace `v5.2.0` with tag name of your choice git submodule update cd .. mkdir build cmmake ../paraview-superbuild after this I am getting this error. CMake Warning at superbuild/cmake/SuperbuildUtils.cmake:242 (message): Failed to determine if the common superbuild is an old checkout. The common superbuild may be out of date, but cannot be verified.: error: unknown option `is-ancestor' usage: git merge-base [-a|--all] <commit> <commit>... or: git merge-base [-a|--all] --octopus <commit>... or: git merge-base --independent <commit>... -a, --all output all common ancestors --octopus find ancestors for a single n-way merge --independent list revs not reachable from others Call Stack (most recent call first): superbuild/CMakeLists.txt:28 (_superbuild_check_up_to_date) CMake Error at superbuild/cmake/SuperbuildMacros.cmake:289 (message): The build tree appears to be inside of the git repository located at /cfs/klemming/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD. This interferes with the way the superbuild applies patches to projects and is not supported. Please relocate the build tree to a directory which is not under a git repository. Call Stack (most recent call first): superbuild/projects/bzip2.cmake:7 (superbuild_apply_patch) superbuild/cmake/SuperbuildMacros.cmake:477 (include) Page 1 of 1 BUILD_SHARED_LIBS ON CMAKE_INSTALL_PREFIX /cfs/klemming/nobackup/k/kriezh/PARAVIEW_SUPER_BUILD ENABLE_boost OFF ENABLE_bzip2 OFF ENABLE_cxx11 OFF ENABLE_paraview OFF ENABLE_paraviewpluginsexternal ON ENABLE_python ON PARAVIEW_BUILD_WEB_DOCUMENTATI OFF PARAVIEW_DEFAULT_SYSTEM_GL ON PARAVIEW_FREEZE_PYTHON OFF PARAVIEW_RENDERING_BACKEND OpenGL2 SUPERBUILD_OFFLINE_BUILD ON paraview_PLUGINS_EXTERNAL paraview_SOURCE_SELECTION 5.4.0 vtkm_SOURCE_SELECTION git-stable
_______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
