Hmm, how about making that Python code into a file and running it with both: mpirun -np 4 pvbatch <file> mpirun -np 4 pvbatch -sym <file>
Just to verify, the allinputsgridwriter.py didn't work with any of the Catalyst examples (e.g. CFullExample), correct? I think this is going to be some issue where we continually bisect the problem space so I appreciate your patience on this. Best, Andy On Tue, Aug 15, 2017 at 2:49 PM, <u.utku.turunco...@be.itu.edu.tr> wrote: > Hi, > > Yes. It works and produces same output. > > --ufuk > > > Hi Ufuk, > > > > It looks like the script line that is not working properly is: > > grid = adaptorinput.GetClientSideObject().GetOutputDataObject(0) > > > > grid is set to None here for your build. Trying something simpler, in > > pvpython can you try the following and let us know if it works: > > ============= > > from paraview.simple import * > > a = Wavelet() > > a.UpdatePipeline() > > b = a.GetClientSideObject() > > c = b.GetOutputDataObject(0) > > print c > > ============= > > > > > > > > It should give output like the following if it works: > > vtkImageData (0x4586a00) > > Debug: Off > > Modified Time: 204809 > > Reference Count: 2 > > Registered Events: (none) > > Information: 0x4586450 > > Data Released: False > > Global Release Data: Off > > UpdateTime: 204810 > > Field Data: > > Debug: Off > > Modified Time: 204775 > > Reference Count: 1 > > Registered Events: (none) > > Number Of Arrays: 0 > > Number Of Components: 0 > > Number Of Tuples: 0 > > Number Of Points: 9261 > > Number Of Cells: 8000 > > Cell Data: > > Debug: Off > > Modified Time: 204783 > > Reference Count: 1 > > Registered Events: > > Registered Observers: > > vtkObserver (0x4586550) > > Event: 33 > > EventName: ModifiedEvent > > Command: 0x45864a0 > > Priority: 0 > > Tag: 1 > > Number Of Arrays: 0 > > Number Of Components: 0 > > Number Of Tuples: 0 > > Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 ) > > Interpolate Flags: ( 1 1 1 1 1 0 0 1 ) > > Pass Through Flags: ( 1 1 1 1 1 1 1 1 ) > > Scalars: (none) > > Vectors: (none) > > Normals: (none) > > TCoords: (none) > > Tensors: (none) > > GlobalIds: (none) > > PedigreeIds: (none) > > EdgeFlag: (none) > > Point Data: > > Debug: Off > > Modified Time: 204809 > > Reference Count: 1 > > Registered Events: > > Registered Observers: > > vtkObserver (0x45864f0) > > Event: 33 > > EventName: ModifiedEvent > > Command: 0x45864a0 > > Priority: 0 > > Tag: 1 > > Number Of Arrays: 1 > > Array 0 name = RTData > > Number Of Components: 1 > > Number Of Tuples: 9261 > > Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 ) > > Interpolate Flags: ( 1 1 1 1 1 0 0 1 ) > > Pass Through Flags: ( 1 1 1 1 1 1 1 1 ) > > Scalars: > > Debug: Off > > Modified Time: 204809 > > Reference Count: 2 > > Registered Events: (none) > > Name: RTData > > Data type: float > > Size: 9261 > > MaxId: 9260 > > NumberOfComponents: 1 > > Information: 0 > > Name: RTData > > Number Of Components: 1 > > Number Of Tuples: 9261 > > Size: 9261 > > MaxId: 9260 > > LookupTable: (none) > > Vectors: (none) > > Normals: (none) > > TCoords: (none) > > Tensors: (none) > > GlobalIds: (none) > > PedigreeIds: (none) > > EdgeFlag: (none) > > Bounds: > > Xmin,Xmax: (-10, 10) > > Ymin,Ymax: (-10, 10) > > Zmin,Zmax: (-10, 10) > > Compute Time: 204875 > > Spacing: (1, 1, 1) > > Origin: (0, 0, 0) > > Dimensions: (21, 21, 21) > > Increments: (0, 0, 0) > > Extent: (-10, 10, -10, 10, -10, 10) > > > > > > > > On Tue, Aug 15, 2017 at 2:27 PM, <u.utku.turunco...@be.itu.edu.tr> > wrote: > > > >> Hi Andy, > >> > >> Thanks for your help and the script. Actually, I was adding input names > >> to > >> the script by hand. Anyway, I tested your script and it gives similar > >> error as follows, > >> > >> File > >> "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/ > >> egl/lib/site-packages/paraview/coprocessing.py", > >> line 305, in CreateProducer > >> if grid.IsA("vtkImageData") == True or \ > >> AttributeError: 'NoneType' object has no attribute 'IsA' > >> grid = adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> File > >> "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/ > >> egl/lib/site-packages/paraview/coprocessing.py", > >> line 305, in CreateProducer > >> if grid.IsA("vtkImageData") == True or \ > >> AttributeError: 'NoneType' object has no attribute 'IsA' > >> grid = adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> File > >> "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/ > >> egl/lib/site-packages/paraview/coprocessing.py", > >> line 305, in CreateProducer > >> if grid.IsA("vtkImageData") == True or \ > >> AttributeError: 'NoneType' object has no attribute 'IsA' > >> > >> I'll tested whole environment once again with Intel compiler to see it > >> helps or not. Let me know if you have any other idea. > >> > >> Regards, > >> > >> --ufuk > >> > >> > >> > Hi Ufuk, > >> > > >> > For the allinputsgridwriter.py you currently need to manually add in > >> the > >> > inputs yourself (i.e. replace the "namedinputs = ['input']" line with > >> the > >> > name of your inputs. That has caught me in the past as well so I > >> decided > >> > to > >> > fix that. Attached is my new version of that script where it doesn't > >> > require you to specify the input names in case you want to try this > >> new > >> > one > >> > instead. If you do, please let us know if that solves your problem or > >> not. > >> > > >> > Best, > >> > Andy > >> > > >> > > >> > On Tue, Aug 15, 2017 at 12:40 PM, Ben Boeckel > >> <ben.boec...@kitware.com> > >> > wrote: > >> > > >> >> On Tue, Aug 15, 2017 at 17:59:47 +0300, > >> u.utku.turunco...@be.itu.edu.tr > >> >> wrote: > >> >> > I solved the problem and i am able to run the simulation code with > >> >> > Catalyst support by installing PV (5.4.0 rc4 and 5.3.0) with newer > >> >> version > >> >> > of protobuf library (3.3.0) and compiling the model code with this > >> >> version > >> >> > of PV (using gcc). > >> >> > > >> >> > Now, the problem is that the code gives following warnings and do > >> >> nothing > >> >> > with standard allinputsgridwriter.py script. Do you think that it > >> is > >> >> > related with protobuf library. The same setup is working without > >> any > >> >> > problem in an other system using Intel compiler. > >> >> > >> >> It'd be better to try with one MPI process rather than…I count > >> 10 to > >> >> get > >> >> the error? Not sure what's up though, Andy? > >> >> > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > grid = > >> adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> >> > grid = > >> adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > File > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > File > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > grid = > >> adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> >> > File > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > grid = > >> adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > File > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > [PERFLOG] :: COPROC 2 0.01404021SEC. > >> >> > Running COP Component: 2005-08-27T00:12:00 --> 2005-08-27T00:18:00 > >> >> Time > >> >> > Step: 2 [ 720.00] > >> >> > ATM-TO-COP: redist mask [CROSS] to mask [CROSS] > >> >> > ATM-TO-COP: redist topo [CROSS] to topo [CROSS] > >> >> > AttributeError: 'NoneType' object has no attribute 'IsA' > >> >> > grid = > >> adaptorinput.GetClientSideObject().GetOutputDataObject(0) > >> >> > File > >> >> > "/home/ext-dell-guest1/rds/hpc-work/progs/paraview-5.3.0/egl > >> >> /lib/site-packages/paraview/coprocessing.py", > >> >> > line 305, in CreateProducer > >> >> > if grid.IsA("vtkImageData") == True or \ > >> >> > >> >> --Ben > >> >> > >> > > >> > >> > > > > >
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