Dear Howard, lists,

Sorry for having been away from the discussions for some time. Hope to catch up 
a bit in the Christmas week.


HP: Chapter 6 is full of examples of signaling and communication by special 
purpose symbols. What is missing is the fact that the existence of all 
thesespecial purpose Dicisigns and perception-action cycles depends on the 
information expressed by the general purpose language of the genes. This 
includes the construction of the nervous systems that can also learn. By 
general-purpose language I mean a communicable (heritable) 
open-ended(evolvable) symbol system that instructs all the organism's special 
purpose signaling, perceiving and acting systems.

Howard is right that genes play a central role in the introduction of the 
semiotic aspect of the world. However, I think he makes it too central by 
simply assuming genes form a general purpose language on which all other 
symbols are dependent.
This discussion is related to the phil-of-biology question of what came first, 
the DNA, the RNA, the cell, the cell membrane, etc.? It seems quite improbable 
to me that a fully equipped general-purpose language emerged as a whole. The 
genes are marvellous regulators but they did not create the processes which 
they regulate. That is why I side with the cell-first proponents in that 
discussion - like Kauffman or Deacon. The basic characteristic of the cell 
seems to be stable, self-sustaining metabolism - supposedly emerging in a 
nutrient-rich environment where chemical cycles from and - in some cases - 
become stable over time - Kauffman's autocatalytic networks, Deacon's autocells 
or autogens. Only later those stable, circular processes acquired membranes to 
further support their stability and genetic regulators to facilitate their 
reproduction. Taking such a picture to approach the order of origin, my 
argument rests on this idea: that the first germs of semiotics lies in the 
metabolic cycle. The metabolic cycle can be said to "need" certain chemicals in 
order to close the circle - this seems to me a plausible first, primitive 
intention.



Also, I don't find any clear distinction between the language in which the 
symbolic information is expressed and the consequent physical action that is 
instructed or constrained. For example, Frederik speaks of the perceptual 
Dicisign reading the active site followed by the action Dicisign of swimming 
(p. 145). He goes on to say that this is not merely a causal process and that 
the semiotic aspect of this process "lies in the fact that the weak local 
interaction makes a whole class of surface stimuli from different sources give 
rise to the same typical behavior. Thus it is the fact that the bacterium does 
not interact causally with the whole of the molecule (before consuming it, that 
is) but merely weakly interacts with a spot on its perimeter which is a 
precondition for its turning a semiotic and not merely causal process."

I do not follow this semiosis vs. causality distinction. There is no reason why 
the actions of the bacterium could not, in principle, be completely causally 
described by chemical and physical laws given the genetically constructed 
molecules. On the other hand, there is a good reason why the order of thesymbol 
sequences forming the language of the genes cannot be causally determined or 
explained by any laws.

I do not think the distinciton between semiosis and causality is as brutal as 
assumed here. I rather think that the fact that primitive metabolism may have 
phases which may be served by different but related molecules (e.g. different 
carbohydrates) could be a first germ of generality.

My reference to the weak molecular forces (van der Waals bonds, hydrogen bonds) 
refers to a later phase where we already have full competent organisms like 
bacteria -  because it is those forces which allow for very primitive organisms 
to detect the presence chemical compounds without entering into full chemical 
covalent action with those compouts (such action immediately destroying those 
compounds, of course, and in some cases, themselves).

All in all, genetic semiosis - which Howard speaks about as being not 
determinable by physical laws -  I take to be the amazing result of early 
biosemiotic evolution rather than its starting point.

Best
F



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